Rosa chinensis (China rose): 112196984
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Entry
112196984 CDS
T06020
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 3 isoform X1
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcn01009
]
112196984
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcn03021
]
112196984
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
112196984
Protein phosphatases and associated proteins [BR:
rcn01009
]
HAD phosphatases
Fcp/Scp phosphatases
112196984
Transcription machinery [BR:
rcn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112196984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
RTT107_BRCT_5
Phage_tube_C
Motif
Other DBs
NCBI-GeneID:
112196984
NCBI-ProteinID:
XP_024193266
LinkDB
All DBs
Position
4:complement(53969269..53974864)
Genome browser
AA seq
1151 aa
AA seq
DB search
MDVEKEDGELEEGEIDLDSESADNEKAAAAGADMNVDSSEGGVKNEVWEKRVNLLREALE
SLTITEAEKSFRDVCLRFLGSLESLRGVLSDISVSTKEALVQQLFTAVQAISSVFCSMSP
DRKEQNKDVLARILSSSKSDPSPFSAEQLKEIEVMISSMESPAVFPQTKAGTQGNEIQSI
NGVNNMDSDTSVANASHVFTYSANNASDFAPVSVVHSNPNISSEVPRSGTSSFKGRGLML
PLLDLHMDHDEDSLPSPTREPPAGFPVQKLSVVADGMVKKSGLETTRVALDVEGSKMHGY
ETEALKAVSSYQQKFSRNSFLTSELPSPTPSEEGDSGDDDTIGEVSSSSAPSNVRTSRPP
ILGRQVVSSPPPPTIIMASSDLQGPITAKSAASVSLVSNMPVKSSAKSRDPRLRFANSDV
GALTLNQQSSIAVHNAPKVDSVITVSSRKHKSPEESNFDGPESKRQRGANSVVGRGAKTS
FGSGGWLEDISSVGPHLINRNQAVEKKEADPRKVNNFSSSPGTQTVEKKEADPRKVINFS
SSPGTVEGNASAQNTANEQVPLMAASSASLPALLKDIAVNPTMLINILKLGQQQRAAEAQ
QKAAVPAESMTYPPSSSSIPGAPALVNDPSKTSGALLTPTISSQKAPTDEAGKVRMKLRD
PRRLLHGNALQKSGSLGHEQFRNIVPPMSGSQTNKDDINGQKQDSQADNNLVPPQSVAVA
APDIASQFTKNLKNIADIMSVSQASSQVSTSPAVPSQNLSTEPVPINRDKVDQKAEDQHT
VSISAPEPTAAGPSRSPATWGDVEHLFEGYDDKQKAAIQRERARRMEEQKKMFAARKLCL
VLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDRKEPQRHLFRFQHMGMWTKLRPGVWNFL
EKASHLFEMHLYTMGNKLYATEMAKVLDPTGALFAGRVISRGDDGDPYDGDERVPKSKDL
EGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERHE
DGTLASSLAVIEKIHEIFFSHPSLDEADVRNILASEQQKILGGCRIVFSRVFPVGEVNPH
LHPLWQTAEQFGAVCTNQIDDQVTHVVANSLGTDKVNWALSSGKYVVHPGWVEASALLYR
RANEQDFAIKA
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgagaaggaggacggggagttggaggagggggagattgatttggattcggag
tctgccgataacgaaaaggcagctgctgctggtgctgatatgaatgttgatagttcagag
ggtggtgtgaagaatgaggtgtgggagaagcgagtgaacttgctaagggaagcattggag
tctctgactattactgaggccgagaaatcatttagagatgtatgtctccggtttcttggc
agtttggaaagcttgcgaggagtactttcggacataagtgtgtctactaaagaagctctt
gttcagcagttgttcactgccgtacaagctattagctcggttttctgctcgatgagccct
gaccggaaggagcagaataaagatgttctagcaaggatactttcttcttcaaagagtgat
ccttctcctttttccgctgagcagctaaaagagatagaggtgatgatatcctctatggaa
tcccctgctgttttccctcaaactaaagcaggtactcagggcaacgagatacagtctatt
aatggggttaacaatatggattcagatacttcagttgcaaatgccagtcatgtgttcact
tattcagctaataatgcttcagattttgcacctgtatctgtggttcatagcaatcctaat
atatcatccgaagttccaagatcagggacatctagttttaagggtagaggactcatgcta
ccccttttagaccttcacatggatcatgatgaagatagccttccatctcctacacgagaa
ccaccagcaggttttcctgtccagaaactatcggttgttgctgatgggatggtaaaaaaa
tcagggttggagacaactcgggtggccctagatgtagaaggttcaaaaatgcatggttat
gaaactgaggctcttaaggctgtttctagctatcaacaaaagtttagtcgtaattctttt
ttgacgagtgaacttccaagcccaaccccttcagaagagggtgatagtggggatgatgat
acgattggggaggtttctagttcttctgcacctagtaatgtgagaacttcccgtcccccc
attttgggtcgtcaagttgtttcttctcctcctcctcctaccatcatcatggctagctct
gacttgcaaggaccaattactgcaaaaagtgcagcctctgtgagtttggtgtctaatatg
cctgttaaatcttcagctaagagtagagaccctaggcttcgatttgccaattctgatgtt
ggtgcgttgacccttaaccaacaatcctcaattgcggtgcataatgcacctaaagtggat
tctgttatcacagtaagctcaagaaagcataaatcccctgaggagtctaattttgatggt
cctgaatcaaaaagacaaaggggtgcaaactcagtggttggtaggggtgcaaaaacttct
ttcggaagtggtggctggttggaggacatcagtagtgttggacctcatttaattaacagg
aaccaggctgtggagaaaaaagaagctgatcccagaaaagtgaataatttttcaagttct
cctggtacccagactgtggagaaaaaagaagctgatcccagaaaagtgattaatttttca
agttctcctggtactgtcgaaggcaacgccagtgcccaaaatactgcaaatgagcaggtg
ccattaatggctgcaagctcagcttccttgcctgcattattgaaagatattgctgtgaat
ccgaccatgttgattaacatacttaagttaggacaacaacaaagagcagcagaagctcag
cagaaggctgctgtgcccgcagaaagtatgacatatcctccgagctcaagttcaataccc
ggagcacctgcattggtgaatgatccttcaaagacatctggagctttgctgacaccaacc
attagttcacaaaaagctccaacggatgaggcaggaaaagtccgcatgaaactccgggat
cctcgccgacttctccacggtaatgcacttcaaaagagtggaagcttgggacatgaacag
tttagaaatattgtacccccaatgtcaggcagtcagacaaacaaggatgatattaatggg
caaaagcaagatagtcaggcagataacaatttagtgcctccacagtcagtggctgtagca
gcccctgacattgctagccaattcaccaagaatcttaaaaatattgctgatattatgtct
gtttcccaagcatcttcccaagtatcaacaagtccagcagtaccttctcagaatctatct
acggaacctgttccaatcaaccgagacaaagttgatcagaaagctgaggaccagcatact
gtaagtatatctgcacccgaaccaactgcagcaggtccatctcgttcgccggccacgtgg
ggagatgttgagcatctatttgaaggatatgatgacaagcaaaaagcagctatccaaaga
gagagagcaagaaggatggaagaacagaagaaaatgtttgcagcacgcaagctgtgcctt
gtgctggatctagatcacacacttcttaattccgctaagtttgtagaagtagatccagtg
catgatgaaattttgagaaagaaagaggaacaggatcgtaaagagccacaaagacatctc
ttccggtttcaacatatgggaatgtggaccaaattgcggcctggggtgtggaatttttta
gagaaggctagtcatctttttgagatgcatctttacacaatgggtaacaagctatatgct
acagaaatggcaaaagtgctagatccaacaggggctctttttgctggacgagttatttct
agaggtgatgatggggatccttatgatggtgatgagagggttcctaagagtaaggatctg
gaaggagttttgggtatggaatcagctgttgtaattatagatgattctgtgagggtctgg
ccacataacaaactgaatttgatagttgtagaaaggtatacctactttccttgtagcaga
cggcaatttgggcttctaggtccttcccttctagagattgatcatgatgagagacatgaa
gatggaactctggcatcctcattggcggttattgaaaagatacatgagatcttcttctcc
catccttccctagatgaagcagatgttagaaatattctggcctctgagcagcaaaagatt
ttgggtggttgtcgtatagtatttagcagggtgtttccagttggtgaggtcaatcctcac
ctacatcctttgtggcagacagctgaacagtttggtgctgtgtgcaccaaccagatagat
gatcaggttacccatgtagttgcgaattctcttgggactgacaaggtgaattgggcactt
tcttctggaaaatatgttgtgcatcctggctgggtggaagcgtcagctttgctttatcgg
agggcaaatgagcaagattttgccattaaagcataa
DBGET
integrated database retrieval system
