Rosa chinensis (China rose): 112197018
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Entry
112197018 CDS
T06020
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112197018
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112197018
Membrane trafficking [BR:
rcn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
112197018
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112197018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
Cnd1
HEAT_2
HEAT
Coatomer_g_Cpla
Motif
Other DBs
NCBI-GeneID:
112197018
NCBI-ProteinID:
XP_024193309
LinkDB
All DBs
Position
4:35432021..35438841
Genome browser
AA seq
948 aa
AA seq
DB search
MEKSCSLLVHFDKGTPAIANEIREALEGNDVEAKIDAMKKAIMLLLNGETLPQLFITIVR
YVLPSEDHTVQKLLLLYLEIIEKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL
CRLNETEIIEPLIPSVLQNLEHRHPYIRRNAILAMMSIYKLPQGEQILVDAPEMIEKLLS
TEQDPSAKRNAFLMLFTCAQDRAVNYLLTNVDKVSEWGELLQMIVLDLIRKVCRTNRGEK
GRYIKIIISLLNVPSTAVVYECAGTLVSLSYAPTAIRAAANTYCQLLLSQSDNNVKLIVL
DRLNELKSSHREVMADMFMDILRALSSPNLDVRRKTLDIVLELVTNRNINEVVLTLKKEV
VKTQNGELEKNGEYRQMLIQAIHSCAVKFPEVASTVVHLLMDFLGDSNVASATDVIVFVR
EIIETNPKLRVSIITRLLDTFYQIRASRVCACALWIIGEYCLSLSEVESGLATIKQCLGE
LPFYSLSEEEEGNDSSKKVQQVNSMTVSSKRPAILSDGTYATQSAASETAFSPPTLVHGS
LASGNLRSLLLTGDYFLGAVVACTLTKLVLRLEEVQPSKVEVHKASAQALLIIVSMLQLG
QSPVLPHPIDNDSYDRMVLCIRLLCNTGDEIKKIWLQSCRQSFVSMLTEKQLRETAEIKA
KAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFIKEGDDANKLNRILQL
TGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLAP
ESSKKIKANIKVSSTETGVIFGNIVYETSNVHERTVVVLNDIHIDIMDYISPAVCSDGAF
RTMWAEFEWENKVAVNTVIQDEKEFLDHIMKSTNMKCLTAPSALDGECGFLAANLYAKSV
FGEDALVNVSIEKQVDGKLSGYIRIRSKTQGIALSLGDKITLKQKGGI
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatcttgtagtctgctagttcattttgataaaggaacacccgcaattgcaaat
gagatcagggaagctcttgaaggcaatgatgtagaggcaaagatagatgcaatgaagaag
gcaatcatgcttttgttgaatggtgaaacattgcctcagctttttatcaccattgttcga
tacgttttgccttctgaggaccacactgtccagaaactactgctgttatatttggagata
attgagaaaactgatgcaaagggtagagtcttacctgaaatgattttaatttgccaaaat
ttgaggaacaacctacagcaccccaatgagtatatccgtggtgtaactctaaggtttctt
tgccggttgaacgagaccgagataattgagccgttaatcccttctgtattgcaaaatttg
gagcataggcacccttatattaggagaaatgctatattagctatgatgtccatatacaag
ctaccacagggtgagcaaattttggttgacgcgcctgaaatgattgagaagcttctttcg
acggagcaggatccatctgctaagcggaatgcgtttctcatgctcttcacttgtgcccag
gaccgtgcagttaattatcttttgaccaatgttgataaggtttctgaatggggtgaattg
ctgcagatgattgtgttagacctgatacggaaagtgtgcaggacaaatcgtggagagaag
gggaggtacattaagatcattatatccttattgaatgtgccttcaactgcagttgtttat
gaatgtgctgggactctcgtttccttgtcatatgcccctactgctattagagctgctgcc
aacacctactgtcagcttcttctttctcagagtgacaacaatgtgaagcttattgttctt
gatcggctgaatgagctaaagtcttctcatagagaagttatggctgatatgttcatggac
attcttagggcactttctagtccaaatcttgacgtccgtaggaagaccctagatattgtt
cttgagctggttactaaccggaacataaatgaggttgttcttacattgaaaaaggaagtt
gttaagactcaaaatggagagctagagaagaatggtgaatacaggcagatgcttattcag
gccattcattcttgtgcagtaaagttcccggaagttgcaagcacagtggtccatttgttg
atggatttcttgggagacagcaatgttgcttcagctactgatgtgattgtgtttgttcgg
gagataattgaaacaaatcctaaactaagggtatctataataacaaggctattggacacg
ttttaccaaatccgagcatcacgtgtttgtgcttgtgctctttggattattggagagtac
tgcctatcactttctgaagttgaaagtggacttgcaacaattaaacagtgtcttggagaa
ttgcctttttactcgctctcagaagaagaagaaggtaatgattcttcaaagaaggttcag
caagtaaactccatgaccgtgtcttctaaaagaccagctattctttctgatgggacttat
gccacacagagtgctgcatctgaaactgctttctccccacctacccttgttcatggatcc
ttggcatctgggaacttgagatccctgcttctcactggtgactattttcttggggcagtt
gttgcttgcacactgaccaagcttgttctgagactggaagaggttcagccatctaaggtg
gaagtgcataaagcatcagcacaagcactgttgataattgtctctatgctgcaattaggc
caatctccagtccttccacatccaattgacaacgattcatatgataggatggtcctctgc
ataagattgttatgcaatactggtgatgagataaagaaaatatggctgcaatcttgccgt
caaagttttgttagtatgcttacagaaaaacaattaagggaaacagcggaaatcaaagca
aaggctcagatttctcatgcacagccggatgaccttattgacttctaccatttaaaaagc
aggaagggtatgagccaactggaacttgaagatgaggtccaagatgatttaaaacgtgct
acaggagagttcatcaaggaaggagatgatgcaaacaagctcaaccgaattctccagctc
actggatttagcgacccagtgtatgctgaagcatatgtgactgtacatcattatgatatt
gtccttgatgtcacagttatcaatcgaaccaaggagaccttacaaaatttgtgcttggag
ttggcaactatgggggatcttaagcttgttgagcggccacagaattatactctggctcct
gaatctagtaaaaaaataaaagccaacatcaaggtgtcctcaaccgagactggagtaata
tttggaaatattgtttatgagacctcaaatgtgcatgagcgaacagttgttgtcctcaac
gatattcatatcgacattatggattacatctctcctgctgtttgtagtgatggagctttc
agaaccatgtgggcagaatttgagtgggagaacaaggttgctgtcaacacagtaattcaa
gacgagaaggaatttctcgaccatatcatgaaatcaactaacatgaagtgcctcactgca
ccatcggccttggatggtgagtgtggattcttggcagctaacttgtatgcaaagagtgtg
tttggagaggatgccttggtgaatgtgagcattgaaaagcaagtggatggaaagcttagt
ggatacatccggataaggagtaagacccagggaattgccctcagtttgggcgataagatt
actcttaagcagaagggaggcatttaa
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