Rosa chinensis (China rose): 112197047
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Entry
112197047 CDS
T06020
Name
(RefSeq) heat stress transcription factor A-5
KO
K09419
heat shock transcription factor, other eukaryote
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112197047
Transcription factors [BR:
rcn03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
112197047
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
DivIC
DUF3450
APG6_N
TMF_TATA_bd
LegC3_N
Seadorna_VP6
DUF4140
Plasmid_parti_C
Phlebovirus_NSM
DUF7491
Motif
Other DBs
NCBI-GeneID:
112197047
NCBI-ProteinID:
XP_024193341
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All DBs
Position
4:37708683..37712382
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AA seq
476 aa
AA seq
DB search
MDGTSAAGGGGGPAPFLLKTYDMVDDSATDEIVSWSSNKKSFVVWNPPEFARLLLPTYFK
HNNFSSFIRQLNTYGFRKIDPERWEFANEEFIQDQKHLLKNIHRRKPIHSHSNPQGSMVD
QERAALDDEIEKLSNEKAALEANISRFQQQRSAEKLQLEDLTQRVNGMEQRQNNLLTFLD
KAVQNPAFVEHLARKIESMDFSAYNKKRRLPDADHSQLVVDNSFVDNQSSSRSEFGNFFH
QDFSNKLRLELSPAVSDMNLVSRSTQSSNEDGDSSSRKISEELKGAQMRTEGLLFANEPL
ELSDTGTSFAFKMDSLSRKAPNVGSPGLHSLQSGLPSNEDSDGQITCHLNLTLSSSPLKV
ISSPHSATVPLVGQDICNSPSPGLNATNKESDIRALPQKNLADEDRPKSSQKEATKHSKG
HISVPVRVNDVFWEQFLTERPGCSENEEASSNFRENPYDEQDGMARNAKGAETLTL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggacggaacctctgctgctggcggaggcggcggtccggcgcccttcttactgaagacg
tacgacatggtggacgactcggcgacggacgagatcgtgtcgtggagctccaacaagaag
agcttcgtcgtctggaaccctccagaattcgctcggcttctgctccccacctatttcaag
cacaacaacttctctagcttcatccgtcagctcaatacctacggatttcgaaagattgat
cctgaaagatgggagtttgctaatgaagaatttatacaagatcaaaagcatcttcttaag
aatattcatcgcagaaaacccattcatagccacagtaatcctcagggttctatggttgat
caggaaagagcagctcttgatgatgaaatagagaagctatcaaatgaaaaagctgcactt
gaggcaaatatttcaaggttccagcagcagcgatctgctgaaaagcttcagttggaagac
ctgacacagcgggtaaatggtatggagcagcggcagaataatttactaacattcttagat
aaagctgttcagaaccctgcctttgttgaacatctagcccgaaaaattgaatctatggat
ttctcagcatataacaagaaaaggcgtctgcctgatgcggaccactcacagctagttgtg
gacaatagttttgtggataaccaaagtagctccagatcggagtttggaaattttttccac
caagacttttcaaataagctgagactggaattatctccagctgtttcagacatgaacctg
gtttcacgtagcacccagagttccaatgaagatggggatagttcaagtaggaaaatatcg
gaagaactgaaaggtgcacagatgagaacagaaggtcttttatttgcgaatgaaccacta
gaactttcggatactggaacatcttttgcattcaaaatggattcgttatcacgaaaagca
ccaaatgttggaagccctggacttcattccttgcagtcaggtttgccttctaatgaagat
agtgatggccagataacctgtcacttaaatctcacactatcatcttctcccttgaaagtg
atcagtagcccgcattcagctacggtacccctagtaggtcaggacatttgcaactcccca
tccccaggtttgaatgccactaacaaagaatcagatataagagcccttccacagaaaaat
ctggctgatgaagacaggcctaaaagttcccaaaaagaggccacaaaacacagtaaaggg
catatatctgttccagttagagtaaatgatgttttctgggaacagttcctaacggaaaga
cctggttgttcagagaatgaagaagcaagttctaattttagagaaaatccgtatgatgag
caagatggaatggccagaaatgctaaaggtgcagaaacacttactctttga
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