Rosa chinensis (China rose): 112197290
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Entry
112197290 CDS
T06020
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X2
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112197290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112197290
Enzymes [BR:
rcn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
112197290
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
HECT type E3
112197290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
112197290
NCBI-ProteinID:
XP_024193679
LinkDB
All DBs
Position
4:51745898..51756831
Genome browser
AA seq
1034 aa
AA seq
DB search
MFFSGDSSNRKRVDLGGRSTKERDRQKLLEQTRLERNRRLWLRQQNSAATKIQKCFRGRK
VATSEYSKVREQFYGTYGKHCQNADKSCFGPDSDFLRQLLFFFDARSVGDFSILVETCRL
LKQFVRDTGDTVSLFAGMDYSSKHALVNYRVKKLAYLCIKAVHQNRNQLKDQLFASPQEC
TVPTTLLLETVVLLIDHKLPWVCKTVSYLLERKAFTLFREIILTGRASIETHNCIDRVSS
LERTLAVVIPHVGQEPCNCPNVGPHWSFSSQILTIPFLWKLLPYLRGVFATRGLSQHYIH
QMALCVHNHADVLPNDTSVELPSYACLLGNILDSSGVALSQPDCSFEMAVDLAAVATFLL
ESLPSIKSSNRQSKEDSMVGEDDTEGDDAMEICLNNDLERQICEAIDSRFLLQFTNVLFG
GISLVSDSHKAPDDREVSAVGAACAFLHVTFNTLPLERIMTILAYRTELVPVLWNFMKRC
NENQKWSSLSEQLAYLLSGDAPGWLLPLAVFCPVYKHMLTIVDNEEFYEQEKPLSLKDIR
SLIIILRQALWQLLWVNPTAPSNSSKSVTSTPAKKKHPVEFIQQRVGIVASELLSQLQDW
NNRREFTSPSDFHADGVNDFFISQAVIENTRANDILKQAPFLVPFTSRVKIFTSQLAAAR
QRHESNSVFTRNRFRIRRDRILEDAYNQMSALSEEDLRGPIRVTFVNEFGVEEAGIDGGG
IFKDFMENITRAAFDVQYGLFKETSDHLLYPNPGSGMIHDQHLQFFHFLGILLAKALFEG
ILVDIPFATFFLSKLKQKYNYLNDLPSLDQELYRHLIFLKHFKGDISELELYFVIVNNEY
GEQTEEELLPGGKNLRVTNDNVITFIHLVANHRLNYQIRQQSSHFLRGFQQLIQKDWIDM
FNEHELQLLISGSLDSLDIDDLRRNTNYVGGYHSEHYVVDMFWEVLKSFSLENQKKFLKF
VTGCSRGPLLGFKYLEPLFCIQRAAGSATDEALDRLPTAATCMNLLKLPPYRSKEQLETK
LMYAISAEAGFDLS
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctcaggcgattcgtcgaatcggaagcgcgtggatttggggggacggagtacg
aaggagagggataggcagaagcttctggagcaaacgaggttggagcgcaaccggcggttg
tggttacgccagcagaactccgccgcaactaagattcagaaatgcttcagagggagaaag
gtagcaacatctgaatattctaaggtgcgggaacagttctatggaacatatgggaaacat
tgccagaatgcagataaatcgtgttttggtccagactcagactttctccgccagttgctt
tttttcttcgatgctcgaagtgttggcgacttttccattcttgtggaaacatgccggtta
cttaagcaatttgtcagagatacaggggatacggtgagcctctttgcaggcatggattat
tcatcgaagcatgctttggtaaattacagagtgaagaaacttgcatatctgtgtatcaag
gctgttcatcaaaatagaaatcaattgaaggatcaactttttgcatctccccaggagtgc
actgtgccaacaactttattgttggaaacagtagtcttgttgattgatcataagcttccg
tgggtttgtaagacagttagctatcttctggaaagaaaagcatttaccctgtttagagag
attattttaacaggaagggctagtatagagactcataattgcattgacagagtatcttca
ttggagcgcactcttgctgttgtaattcctcacgttggtcaggagccatgtaactgccca
aatgttggtccacactggagtttttcgtctcagattcttacaattcctttcttgtggaag
ctactaccatatttaagaggggtttttgcaacgcgtgggctgagccaacattacattcat
cagatggcactctgtgtgcataatcatgctgatgtgcttcccaatgatacatcagttgag
ttacccagttatgcctgccttctgggaaatatactagattcttccggagttgctctgtct
cagcctgactgctcatttgaaatggctgtagaccttgctgctgttgcaacattcttgttg
gaatcccttccttcaataaaatcgtcaaacagacaaagcaaggaagattccatggtgggt
gaggatgatactgagggagatgatgcaatggaaatatgtttgaataatgatttggaacgg
cagatttgtgaggccatagattcacgctttcttctgcaatttacaaatgttttgttcgga
gggatttcacttgtcagtgattcacataaagcaccggatgatagagaggtgtcagctgtt
ggcgcagcgtgtgcttttctacatgtcactttcaacaccttacctcttgagagaatcatg
actatcctagcttatagaaccgaacttgtccctgttctatggaactttatgaaacggtgc
aatgagaaccagaaatggtcttcattgtctgagcaattggcatatctactgtcaggagat
gcacctggttggctattacctttggcagttttctgtcctgtgtacaagcacatgcttaca
atagttgataatgaggagttctatgaacaggagaagccactatcgttgaaggatatcaga
tccctaattatcatactcagacaggctctatggcagcttctctgggtgaatcctacggct
cccagtaactcttcgaaatctgtcaccagcacccctgcaaagaagaagcaccctgtggag
ttcattcaacagagggttgggatcgtagcatctgaactcctctcccagttgcaagattgg
aacaatagacgagagtttacttcccccagtgacttccatgctgatggtgtcaatgatttc
ttcatttcgcaggccgtgatagaaaatacccgagccaatgacattttgaagcaagctccg
ttcctagtaccgttcacaagcagagttaaaatattcacttcacaattggcagcagctaga
caaagacacgagtctaattctgtgtttaccagaaaccggttcagaatacggcgggatcgt
atcttggaagatgcttataatcagatgagtgcattgtctgaagaagatcttcgaggaccg
attcgggtaacatttgtaaatgaatttggggttgaagaagctggaattgatggtggtggg
atttttaaagatttcatggagaacattactcgagcagcctttgatgtccagtatggttta
tttaaggaaacatccgaccatctcctctaccctaatcctggttcaggaatgattcatgat
cagcatctccaatttttccactttctgggaattcttcttgcaaaggccttgtttgaggga
attcttgttgatattccatttgcaacgttcttcctgagcaaattaaagcagaagtacaac
tacttgaatgatttaccttcattagaccaagaattgtatcgccaccttattttcttgaag
catttcaaaggtgatatttcagaactagaactatattttgtgattgtaaataatgagtat
ggggagcaaacggaagaagagctgcttcccggcggaaaaaacctacgtgtcactaatgac
aatgtcattacttttattcatcttgttgccaatcaccgtttaaattatcagatacgtcaa
caaagttctcatttcttaagggggtttcagcagcttatacagaaagattggattgatatg
tttaatgagcatgaacttcagcttctgatatcaggttcacttgacagcctggatattgat
gatctacggagaaacactaactatgttggtggctatcacagtgagcattatgttgttgac
atgttctgggaagttctcaaaagcttttcattggaaaatcagaagaaatttttgaaattt
gtgactgggtgctctagaggaccattgcttgggttcaagtaccttgaaccattgttttgc
atccagagagctgctggtagtgcaactgatgaagctcttgaccgattgccaactgcggct
acatgtatgaatctgctgaagcttccaccatatcggagcaaggagcaattagaaacgaag
ttgatgtatgcaataagtgcagaagctggttttgatttgagctga
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integrated database retrieval system
