Rosa chinensis (China rose): 112197295
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Entry
112197295 CDS
T06020
Name
(RefSeq) ABC transporter B family member 11
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112197295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112197295
04147 Exosome [BR:
rcn04147
]
112197295
04090 CD molecules [BR:
rcn04090
]
112197295
Enzymes [BR:
rcn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112197295
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112197295
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112197295
CD molecules [BR:
rcn04090
]
Proteins
112197295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
AAA_22
RsgA_GTPase
Zeta_toxin
AAA_16
AAA_21
AAA_30
AAA_5
AAA_15
DEAD
AAA_24
AAA_7
nSTAND1
4HB_MCP_1
Motif
Other DBs
NCBI-GeneID:
112197295
NCBI-ProteinID:
XP_024193687
LinkDB
All DBs
Position
4:complement(52440087..52445786)
Genome browser
AA seq
1286 aa
AA seq
DB search
MADHEEQSDGDVLKEPAMASTKAADSENNKQDTAGKSKEGATNTVPYYKLFSFADSLDYM
LMSVGTISAIGNGLCMPLMTVIMGEVINSFGETTSINKVVGIVSKVALKYVYLALGAAAA
AFLQMSCWMITGERQAARIRSLYLRTILRQDVGFFDTEANTGEIVDRMSGDTVLIQEAMG
EKVGSFIQLVATFIGGFVIAFAKGWRLTLVMLTSIPPLILSGAVTSLTIRKLASRGQEAY
SVGATVVEQTIGSIRTVASFTGEKQAITKYNNSLTKAYKSGVQEGLASGLGLGMVVLVVF
CSYALAVWYGGKTILEQGYKAGDVMNVIFALLTGSFSLGQASPCVSAFHAGQAASFKMFE
TINRKPDIDAYDTNGMESEDIRGDIELRDVSFSYPARPDEKIFHGFSLSISSGATAALVG
QSGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLNWIRQKIGLVSQEPVLFTCSIRDN
IGYGKDGATTEEIRAAAELANAANFIDKLPQGLDTMVGEYGTQLSGGQKQRVAIARAILK
NPKILLLDEATSALDAESERVVQEALDRITVSRTTVIVAHRLSTVRNADTIAVIHRGTIV
EQGPHTELVKDPDGAYSQLMRLQEISSVSEQNAQNDHERPELSSSFQKLPSFRSISRGSS
GRGISSRRSYSFSISHGAPTITGVLEIQPDIPASASSEVHPQVSLRRLAYLNKPEIPVLF
LGTIAAIVNGITLPIFGVLISNIIKTFFEPPHQLRKDSKFWALIFIVLGVVSLLAHPMRA
YFFAVAGCKLIRRVRSLCFEKVVYMEVSWFDEADHSSGAIGARLSTNAASLRGIVGDALG
LAVMNTSTTIAGLVIAFVANWQLALIILVMLPLLGISGYFQVEFMKGLSANAKIMYEDAS
QVATDAVGSIRTIASFCAEEKVIKLYQTKCEGPIRSGIRQGIVSGIGFGLSFFLLYSVYA
CSFYAGARLVAAGKTTFPNVFRVFFALTMTAIALTHQQSSLAPDASKGKSSAASIFAILD
RKSKIDSSDDSGTTIENLKGEIEFRHVSFKYPNRPNVPIFQDLCLTIRHGKTVALVGESG
SGKSTVISLLQRFYDPDSGQITLDGTEMQTLQLKWLRQQMGLVSQEPLLFNDTIRANIAY
GKEGEATEAEIIAAAELANAHKFISSLQQGYDTIVGERGVQLSGGQKQRVAIARAIMKAP
KILLLDEATSALDAESERVVQDALDRVMVHRTTVVVAHRLSTIKGADLIAVVKNGVIAEK
GKHETLISIEGGTYASLVSLHASTSS
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcacgaagaacagtcagatggagatgtattaaaagagccggccatggcatca
acaaaggcagcagattccgaaaacaacaagcaggatactgcaggcaagagcaaggagggt
gcaaccaacacagtaccatattacaagctcttctcatttgctgattccctggattacatg
ttaatgtctgttggtacaatcagtgctatcggaaatggactatgtatgcctctaatgacc
gtgatcatgggggaggtgatcaactcttttggagaaactacgagtatcaataaagtggtt
ggtatagtttccaaggtggctctcaagtacgtttacttggctctgggggctgctgctgct
gcatttttacaaatgtcttgctggatgatcactggagagagacaggcagcaagaataaga
agtttatacttgagaacaatactaaggcaagacgttggcttttttgatacagaggctaac
actggggaaattgttgacaggatgtcgggggatactgtgctcattcaggaagcaatgggg
gagaaagtaggaagctttatccagttagttgctacattcataggaggctttgttatagcc
tttgccaagggatggcgtctcacccttgtcatgctaacctctattccccctcttatctta
tccggtgctgtcacgagcctcactataaggaagttggcgtcccgtggacaagaggcatat
tcagttggagcaactgttgtagagcagaccattggttctatcagaactgttgcatcattt
acgggggagaagcaagctataaccaagtacaacaactccttaactaaagcttacaagtct
ggtgtgcaagagggtttggcatcagggttgggtcttggtatggttgtgcttgttgtattc
tgcagttacgctttggcagtatggtatggcggaaaaacgatacttgaacagggatataaa
gcaggagatgtcatgaatgtgatttttgctttattgaccggctctttctctcttgggcag
gcatctccatgcgtgagtgcatttcatgctggacaagctgcatcatttaagatgtttgag
acaattaacagaaagccagatatagatgcttatgacactaatgggatggaatcagaagac
attcgtggagacatagaacttagggatgtttcttttagttatcctgcaagaccggatgaa
aaaatattccatggattctcactctcaatatctagtggtgcaactgctgctttggttgga
cagagtggaagtggtaaatcgaccgtaattagtttgattgagagattttatgatccacag
gctggtgaagttcttattgacggtattaatctcaaagagttccagctgaattggatcaga
cagaaaatagggcttgtcagccaggaacctgttttgtttacttgcagcattagagataat
attggctatgggaaggatggtgcaactactgaagaaataagggctgctgctgagcttgcc
aatgctgctaatttcatagacaaactacctcagggactagatacaatggttggtgagtat
ggaactcagctatctgggggccaaaagcagagagttgctatagccagagcaattttaaag
aacccaaaaattcttcttttagatgaagcaacaagtgctcttgatgcagaatctgagaga
gttgtgcaagaggcattggacagaattacggttagtcggactactgtcattgtagcgcac
cgcttgagcacagtaaggaatgctgataccattgcagtgatacatcgcggaacaattgtt
gagcaaggaccacatactgagctagttaaggatcctgatggtgcatatagccagcttatg
aggttgcaagaaattagcagtgtgtcagaacaaaatgctcaaaatgatcatgaaaggcca
gaactttcttcaagttttcaaaaacttccttcctttcgctccataagtcggggatcatct
ggaagaggaatcagtagtcgacgcagctactcattctcaatctcacatggtgcacccacc
ataaccggtgtccttgaaatacaacctgatattccggcttcagcatcatcagaagtgcat
ccacaagtctcacttagacgcctggcttacctgaataagccagaaatcccagtgctattc
ctaggtactatagctgcaatagtcaatgggataaccttgcccattttcggggtgttgata
tccaatataatcaagaccttctttgagccacctcatcaactccgaaaggattccaagttt
tgggcattaatatttattgttcttggagtggtgtctctcttggcacatccaatgagagca
tacttttttgctgtagctgggtgcaagttaataagacgagtccgttcactatgctttgag
aaggtggtttacatggaagtaagttggtttgatgaagctgatcactcgagtggtgcaatt
ggagcaaggctttcgacaaatgcagcttccctacgggggattgttggagatgctctaggt
ttagctgtcatgaatacatcaacaacaattgccgggttggttattgcttttgtggcaaat
tggcaacttgctcttataatacttgttatgctgcctctactaggaataagtggatatttt
caagtcgagttcatgaaaggattaagtgcaaatgcaaagataatgtatgaagatgcaagc
caagtagccacggatgctgtggggagtattagaacaattgcttccttttgtgctgaagaa
aaggtgatcaagttgtaccagacaaaatgtgaaggccctatcaggagtgggataagacaa
gggatagttagtggcataggttttgggctatcatttttcttgctttattctgtatatgca
tgcagtttttatgctggggctcgtcttgttgcagcaggcaagacaacatttcctaatgtt
tttcgggttttctttgctctcactatgacagctattgcattgactcatcagcagagttct
ttagccccggatgcaagtaaaggaaagagctctgccgcttccatatttgcaattcttgac
cggaaatccaagatagattcaagtgatgactccggaacaacaatagaaaatctgaaggga
gaaattgagtttcgccatgttagtttcaaatatccgaatagacctaatgtgcccatcttt
caggatctttgcttgaccattcgccatggcaagacagttgctctggttggagagagtgga
agtgggaagtcgacagtgatctcattgttgcagcgcttttatgatcctgattcaggtcaa
attacgttagatggtacagaaatgcaaacattacagttgaagtggttgagacagcaaatg
gggctggtgagtcaggagcccctattgtttaatgacacaatccgagccaacattgcatat
ggaaaagaaggagaggcaactgaggctgaaattatagcagcagcagaattggcaaatgct
cacaagttcattagtagtttacaacagggttatgacacaatagtgggtgaacgaggggtt
caactttctggtggacagaagcaaagggtagctattgcaagagctataatgaaggcacca
aagatattactactagatgaagccaccagtgctcttgatgctgaatctgaacgagtggtt
caagatgcactggaccgagttatggtgcatcgaactacagttgtggttgcccatcggctg
tccacgattaagggtgcagatttaatagcagtggtgaaaaatggagtcattgcagagaaa
ggaaagcatgagactttgatcagtatcgagggtggaacttatgcttctttggtatcacta
catgcaagtacctcatcttag
DBGET
integrated database retrieval system
