Rosa chinensis (China rose): 112197333
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Entry
112197333 CDS
T06020
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112197333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112197333
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112197333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
112197333
NCBI-ProteinID:
XP_024193721
LinkDB
All DBs
Position
4:64390495..64398715
Genome browser
AA seq
1484 aa
AA seq
DB search
MSREDDVVMRDVTNAGLVVSDRIGREVASQLDLEESLEASRYASHPYATHPREWPPLAEV
VDTWELPPVLIERYNAAGGEGTTLCGIFPEIRRAWASIDNSLFLWRFDKWDGQCPEYSGE
DQAICAVGLAKSKPGVFVEAIQYLLILATPVQLSLVGVCCSGGADGTDPYAEVSLQPLPE
YTVPSDGITMTCITCTEKGRIFLAGRDGHIYELQYTTGSGWQSRCRKVCLTAGLGSIISR
WVLPNVFKFGAVDPIIEMVFDNERHILYARTEEMKLQVFILGQNADGPLKKVAEEKNLIN
LRDVHYGGRQSTGPRAPNRTTKSSIVCISPLSTLESKSLHLVAVLSDGRRMYLTTSPSSG
NLGGFNTDHDKPSCLKVVTTRPSPPLGLSGGLAFGTMSLAGRPQNDDLSLKVEAAHYSAG
TLVLSDSSPPTMSSLLIVNRDSSTQSAGSSTLGTSSRSSRALRESVSSLPVEGRMLFVAD
ILPLPDSTTAILSLYSAIEYGGYESLEESCEKVSAKLWARGDLSIQHILPRRRFVVFSTM
GMMEIVFNRPVDILRRLFESNSPRSILEEFFNRFGPGEAAAMCLMLAARVVHSENLISNV
VSQKAAEAFEDPRLVGMPQLEGNSALSNTRTAAGGFSMGQVVQEAEPVFSGAHEGLCLCS
ARLLFPVWELPVVIVKGSLGSTSAMSENGLVICRLSVEAMQVLENKIRSLEKFLRSRRNQ
RRGLYGCVVGSGDLTGSILYGASSEFGASDHMVRNLFGAYSRTTESNAGGSSSKRQRLPY
SPAELAAMEVRAMECIRQLLLRSSEALFLLQLLSQHHVTRLVESFDADLRQALVRMTFHQ
LVCSEEGDRLATRLISALMEYYTGPDGRGAVDDVSSRLRDGCPSYYKESDYKFFLAVECL
ERAAVLPDPVEKENLARKAFDFLSKVPESADLRTVCKRFEDLRFYEAVVHLPLQKAQALD
PAGDAFNDQIDTADREYAVAQRVQCYEIIISALRSLKGDPSQREFGSPLRRAAAQPILDQ
VSRNKYICQIVQLGIQSPDRLFHEYLYRAMIDLGLENELLENGGPDLVPFLQSAASEHIQ
EARAISAVTSMASPMGHSVASSNQAKYSELLAQYYILKRQHLLAAHVLLRLAERRFTSGD
VPTLDERYNYLKNAVIQAKNASSDGLVGSAHGAYDNGLLELLEGKLAVLRFQIKIKQELE
ALVSSAEDLPGASESHGTDPSGTLTADSNFVNIAQEKAKELSLDLKSITQLYNEYAVPFE
LWEICLEMLYFASYSGDPDSSMVRETWARLIDQSLSRGGVAEACSVLKRFGADIYPGDGA
GLPLDTLCLHLEKAALERQESGVESVGDEDVSRALLAACKGATEPVLNTYDQLLTSGAIL
PSPNLRLRLLRSVLVILREWAMSLFAQRMGTSNTGASLILGGTFSGEQRAVVNQGVRDKI
SSAANRYMTEVRRLALPQHLTEPVFQGFRELEESLLSPFPFDRY
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggaggacgacgtcgttatgcgcgatgtgaccaatgcgggcctggtcgtcagt
gaccgaatcggcagagaagtcgcgtcccagctcgatctcgaagaatccctagaagcttcc
cgatacgctagtcacccttatgctactcatcccagagagtggccacctttggcggaagtg
gtggatacttgggagttgcctccagtacttatcgaaagatataatgcagctggcggggaa
ggaactacattatgtgggatatttcctgagattcgcagggcctgggcatcaatagataat
tccttgtttctgtggcgtttcgacaagtgggatggacagtgtcctgaatatagcggggag
gatcaagctatttgtgctgttggtcttgctaaatctaaacctggtgtttttgttgaagct
attcagtatcttttgattttggcaacacctgttcagttaagtcttgtgggagtatgttgc
tctggaggggctgatggcacagatccatatgcggaggtctcactgcagccattgccagag
tatactgtaccgtctgatgggatcaccatgacttgtatcacatgtacggaaaagggtcgt
attttcctggctgggcgtgacggccacatctatgagttacagtatacaactggatcaggc
tggcaatcaagatgtcggaaagtttgtctgactgctggtttaggaagtatcatttcaaga
tgggtattaccgaatgttttcaagtttggagctgttgatcccatcattgaaatggttttt
gataatgagagacacatattgtacgcaagaactgaagaaatgaaacttcaggtttttatt
ctggggcaaaatgctgatgggccattgaaaaaagtggcagaagaaaaaaatttgatcaat
ctgagggatgttcattatggaggcagacaatcaactggacctagagctccaaatcgaacg
acaaagtcatctatagtttgcatatcaccattgtctactcttgaatcgaagtctctacac
cttgttgctgttttatcagatgggagaaggatgtaccttaccacttctccatctagtggg
aatttgggtggatttaatacagaccatgacaaacctagttgtttaaaagttgtgacaacc
aggccttctcctcctttagggcttagtggtggacttgcctttggaacaatgtctcttgct
ggtagacctcagaatgatgatctctccctaaaggttgaggcagcacattattctgctgga
actcttgtcctttctgattcatctccgccaacaatgtcatctcttcttattgtaaaccgt
gactcaagcacgcaatcagctgggtcgagtactctggggacaagttcaaggagttctcgg
gcattacgggaatctgtatcttctttaccagttgaagggcgaatgctttttgttgcagat
atattacccttgccagattctacaactgccatactgtctttgtattcagcaattgaatat
ggtggatatgaaagcctagaggagtcatgtgagaaggtatctgcaaagctttgggccaga
ggcgatctttcaatccaacatatattaccaaggaggcgatttgttgttttcagtactatg
ggcatgatggaaatagttttcaacaggcctgtagacattctgaggaggttgtttgagtcc
aactcgcccaggtcaatcttggaagaattcttcaatcgttttggacctggtgaagcggct
gccatgtgtttaatgctagcagccagggtagttcattcggaaaatcttataagcaatgtt
gtttctcagaaggcagctgaagctttcgaggacccaagacttgttggaatgccacaactt
gagggaaacagtgcattatctaacactagaacagctgcggggggatttagcatggggcag
gttgttcaggaggctgagcctgtgttttcaggtgcacatgaagggctttgtttatgctct
gcaaggttgctttttcctgtctgggaacttcctgttgtgattgtaaaaggcagtttaggt
tctacaagcgctatgtcagaaaatgggttagtcatctgcaggctctctgttgaggctatg
caagtgcttgaaaacaagattcgttcactagagaagtttctaaggtccagaaggaaccaa
agaaggggcctttatggctgtgttgttggttcaggagacttgactggctctattctttat
ggagccagttcagaattcggtgccagtgaccacatggttagaaacttatttggtgcctac
tcacggactactgagtctaatgctggtggctcatctagtaaaaggcagagactaccatat
agtcctgctgaactggcagccatggaggtcagggccatggaatgcattaggcagttgcta
cttcgatctagtgaagccctgtttctgctccagcttctttcacagcaccatgtaactcgc
ttggttgagagctttgatgctgatctacgacaagcattagttcgaatgacattccatcag
ttagtttgctctgaggaaggagaccgtcttgctacaaggctcatatctgctctaatggag
tattatactggtcctgatggcaggggtgcagtagatgatgttagttcaagattacgggat
ggttgtccaagctactataaggagtctgattacaagttttttctagctgtggagtgtctt
gagagagctgctgtacttccagatcctgtggagaaggagaatctcgcaagaaaagccttt
gatttcttaagtaaagttccagaatctgctgatttacgaactgtttgcaaacggtttgaa
gatttaagattttatgaagctgtggttcacttacctttacaaaaggcacaggctcttgac
cctgcgggtgatgcttttaatgaccaaattgatacagcagatcgagaatatgcagttgct
caacgtgtacagtgttatgaaattatcatcagtgcactgcgttccctgaaaggtgacccg
tcacagagggagtttggttctcctcttaggcgtgctgctgcacagcccatccttgatcag
gtctctcggaacaagtatatatgccagattgttcagcttggcatccaatctcctgacaga
ttatttcatgagtacttgtaccgtgctatgattgatttgggacttgaaaatgagttgttg
gaaaacggaggtcctgatttggtaccttttttacaaagtgccgccagtgaacatatacaa
gaggctagagctatttcagcagtgacctccatggcctctccaatgggacattctgtagca
tcatctaatcaagccaaatattctgagcttttggcacagtactatatcttgaagaggcag
catctgcttgcagctcatgtattgttacgactggctgagaggcgattcacttcaggggat
gttcctactctagatgaaaggtacaattacttgaaaaatgcagtcatacaggcaaaaaat
gctagtagtgatggcctggtaggttctgcacatggtgcttatgacaacgggcttttagaa
ttgttggaaggaaagcttgctgttctccgttttcagataaagatcaaacaggaacttgag
gctttagtctccagcgcagaagatttgcctggtgcatctgagtcccatggaactgacccc
agtggcactttaacggctgattccaattttgtaaatattgcacaagaaaaggctaaagag
ctatcattagacttgaagagtataactcagctatacaatgagtatgctgttccattcgaa
ctttgggagatatgtctagaaatgctatactttgcgagctattctggtgatccagatagt
agcatggtaagagaaacttgggctagattaatcgaccaatctctttcaaggggtggtgtt
gccgaagcttgttcagtattgaagagatttggtgctgacatttatcctggagatggagct
ggcttacccttagacacactttgccttcaccttgaaaaagcagcactggaaagacaggaa
tcaggagttgaatctgttggagatgaagatgtatcaagggctcttcttgctgcttgcaag
ggtgcaactgagcctgtactgaacacatatgatcagttattaacgagtggtgctatttta
ccctcgcccaacctcaggctacgccttctccgatcagtactcgtgatacttcgtgagtgg
gcaatgtcattgtttgcccagagaatgggtacaagtaatactggagcctctttaatatta
ggtggaacattttcaggggagcagagagcagttgttaaccaaggggttcgagataagatc
tctagtgcagccaacaggtatatgactgaggtacggaggttggctcttccacagcatctt
accgaacctgtttttcaggggttccgagaacttgaagagtcacttttaagtcccttccca
tttgatcgttattga
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integrated database retrieval system
