Rosa chinensis (China rose): 112197340
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Entry
112197340 CDS
T06020
Name
(RefSeq) structural maintenance of chromosomes protein 6A
KO
K22804
structural maintenance of chromosomes protein 6
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112197340
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
112197340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
SbcC_Walker_B
AAA_29
CENP-F_leu_zip
AAA_21
ADIP
NPV_P10
Baculo_PEP_C
DUF1664
LRAT
ABC_tran
Motif
Other DBs
NCBI-GeneID:
112197340
NCBI-ProteinID:
XP_024193764
LinkDB
All DBs
Position
1:62054278..62066265
Genome browser
AA seq
1051 aa
AA seq
DB search
MAEPIAGSRHRSKAGIVQKIRLENFMCHSSLQIELGDWVNFITGQNGSGKSAILTALCVA
FGSRAKETQRGSTLKDFIKTGCSYAVVHVELKNQGEDAFKPDIYGDVIIIERKISGASNA
TVLKDHQGRKVASRKEDLRELIEHFSIDVENPCVIMGQDRSREFLHSGNDKDKFKFFYKA
TLLQQVEELLQDIEKQLEKANVVVDQLEGSIRPIERELNELHEKIKNMEHIEEISQQAKQ
LKKKLAWSWVYDVDRQLQQKNAKIGKLKNRVPLCQAKIDQFRGEVEKLSQCYTLKKSEIA
SMVEKTAEVRRMKDELRQSLASATKEKLKLEEEYGRKTNYIQKLTNSVRSLQQQIQDAEE
QHARNTQAEESAMEEKLKELHNEVATIESMLARLQEEDSALSISVHKTITEIGKLTEMIQ
SREKECQKCSNKVREVLRNQSNKVTAFGGDRVMDLLRIIERNHQRFKSPPIGPIGAHLTL
NNGDEWARTVENAVGRLLNAFIVTNHKDSQLLRTCAREASYNHLQIIIYDFSLPRLNIPP
HMLPQTRHPTTLSLLHSENHTVVNVLVDMGSVERQVLVKTYEEGKEVAFDQRIPNLKEVY
TYDGRKMFSRGSVQTVLPPIRHDRPARLCANYDDQISELKTSASAVQKEAEECRTRKREE
EDKLWNLKEKHQSVKRRRMNADRDLASKRLAIQDSAYDAEASTSPASTVDDLHQDILKVQ
EEIQEREMSLKTFEVRISEAVAKTNDLKVTFENLCESAKGDIDAFEKAERDLMEIETKLG
SAQTEKLHYEGLMKTKVLHEINDAEKQYKELEHHREDNCRKASILCPESEITALGDWDGS
TPEQLSAQLTRLNQRLQRESERCTESIDELRMSYERKERKILRKQKTYRAFREKLNACQK
ALKLRSTKFQRNKDLLKRQMTWRFNSHLGRKGFSGKIKVSYEERTLSIEVKMPQDSSSST
VRDTRGLSGGERSFSTLCFALALHDMTEAPFRAMDEFDVFMDAVSRKISLDTLVEFALAQ
GSQWVLITPHDISMVKNGDRIKKQQMAAPRS
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggccgagccaatcgccggcagtcgccaccgttccaaagccggaatcgtccagaaaatc
cggttggagaacttcatgtgccacagtagcttgcagatcgagctcggcgattgggtcaat
ttcatcaccggtcaaaatgggagtggtaaaagtgcaatactgacggctctgtgtgtcgca
tttgggtcccgagctaaggagactcaaagagggtctacattaaaagatttcataaaaact
ggttgcagttacgctgttgtccatgttgaattgaagaatcaaggggaggatgctttcaag
cctgatatttatggggatgtgataatcatagagcgcaagatttctggagcttcaaacgcc
actgttttgaaggatcatcaaggaagaaaggttgctagtcggaaggaggacctccgggag
ctaattgaacattttagtattgatgttgagaatccatgtgtaataatgggccaagacaga
agcagagagtttttgcattctgggaatgacaaagataaatttaagttcttttacaaggca
acacttctgcagcaagttgaagagcttttgcaagacattgagaaacagttggagaaggca
aatgttgttgttgatcaattagagggctccataagacccatagaaagggaacttaatgag
ttacatgaaaagatcaaaaacatggagcacattgaagaaatatctcaacaagcgaagcag
ctaaaaaagaagcttgcttggtcatgggtatatgatgtagacaggcaactccagcaaaag
aatgcaaaaattggaaagctgaaaaatcgtgtacctctttgtcaagctaaaattgatcag
tttagaggtgaagtggagaaacttagccaatgctataccttgaagaaatctgagattgca
agcatggtggaaaagaccgctgaagttaggagaatgaaggacgaattgcgacagtcgcta
gcatcggctacaaaagagaagcttaagctagaagaagaatatggccgcaaaactaactac
atccagaaattgacaaactctgttaggtctcttcagcaacagattcaggatgctgaggag
cagcatgccagaaatacacaggcagaagaatctgcaatggaggaaaagctgaaagaactg
cataatgaggtcgctactattgaatcaatgcttgcaaggttgcaggaagaagacagtgcc
ttatcaataagtgtacacaagacaattactgaaattggaaaattaactgaaatgattcaa
agcagagagaaggaatgtcaaaaatgctccaataaagtccgcgaggttttgagaaatcaa
agcaacaaggtcacagcttttggtggagatagagtgatggaccttctacgtataattgag
aggaatcatcagagattcaaaagccctccaattggtccaattggtgcccatttgactttg
aataatggagatgaatgggctagaactgttgaaaatgctgtaggaaggctgctcaatgct
ttcattgtaacaaatcataaagactctcaacttctcagaacatgtgcaagggaagcaagc
tataatcaccttcagattatcatatatgacttttcattaccaaggttgaatattccacct
cacatgcttccacaaacaagacacccaactactctttctcttctccattctgaaaatcat
actgtggtaaatgtcctggtagatatgggaagtgttgaaaggcaagttcttgttaaaaca
tatgaggaggggaaggaagttgcttttgaccagaggatccccaatctgaaggaggtctac
acttatgatgggcgaaagatgttttcgcgtggttctgtccagacagttcttcctcccatt
aggcatgatagacctgctcgtctctgtgctaattatgatgatcaaatcagtgagcttaaa
acatcagcatcagctgtacaaaaagaagctgaggagtgcaggacgagaaaaagggaagaa
gaagacaaactttggaatctcaaagaaaaacaccaaagtgtgaagaggaggcgtatgaat
gctgaccgtgatttggcgtctaagagactagctattcaagacagtgcatatgatgcggaa
gccagtacatcacctgcatcaactgttgatgaccttcatcaagacattttgaaagtccaa
gaggagattcaagagagggaaatgtcgctgaaaacctttgaagtcagaattagtgaagct
gtggcgaagaccaatgatcttaaagtaacatttgagaatctatgtgagtcagcaaaagga
gacattgatgcctttgagaaagcagagagagatttgatggagatagaaacaaaactaggt
tctgcgcaaacggagaagcttcattatgaaggtctaatgaagaccaaggtccttcatgaa
atcaatgacgctgaaaaacaatataaagagcttgagcatcaccgcgaggacaactgtaga
aaggcttcaatcctctgtcctgaaagtgaaattacagctttgggtgattgggatggtagc
actccagaacaactcagtgcccaattaaccaggctgaatcagagacttcagcgagagagt
gagagatgcactgaatccattgatgagctccgaatgtcatatgagagaaaagaacgtaag
attttaagaaaacagaaaacatacagagcttttcgagaaaagttgaatgcttgccagaaa
gccctaaagttgcgaagtacaaagttccagagaaataaagatttactaaagcgccagatg
acgtggcgatttaattctcatctgggaaggaaagggttcagtgggaagattaaggtcagt
tatgaggagagaaccctttcaattgaggtaaagatgccccaggattcatcaagcagcact
gttcgcgacactagagggctttcaggtggagaacgctccttctcaacattgtgctttgcg
ctggctcttcatgatatgactgaagccccatttagagctatggatgagtttgatgtattt
atggatgctgtaagtcggaaaatcagccttgatactcttgttgagtttgcattggcgcaa
ggatcccaatgggtacttatcacccctcatgatatcagcatggtgaaaaatggggatcgg
ataaagaagcagcaaatggcggctcctcgttcttga
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