Rosa chinensis (China rose): 112197393
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Entry
112197393 CDS
T06020
Name
(RefSeq) probable acyl-CoA dehydrogenase IBR3
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00071
Fatty acid degradation
rcn00280
Valine, leucine and isoleucine degradation
rcn01100
Metabolic pathways
rcn01110
Biosynthesis of secondary metabolites
rcn01212
Fatty acid metabolism
Module
rcn_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
rcn_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
112197393
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
112197393
Enzymes [BR:
rcn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
112197393
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Gene cluster
GFIT
Motif
Pfam:
APH
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA_dh_N
Kdo
EcKL
Motif
Other DBs
NCBI-GeneID:
112197393
NCBI-ProteinID:
XP_024193808
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All DBs
Position
4:complement(49006529..49012639)
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AA seq
820 aa
AA seq
DB search
MANELDLDALLRYAAANVTGFPPSPSNFTVSKFGHGQSNPTYLMQVGSGASVKRYVLRKK
PPGKLLQSAHAVEREFQVLQALGNHTVVPVPKVFCLCTDPSVIGTAFYIMEFLEGRIFVD
PRLPGVEPASRRAIYQATAKALASLHSADVDAIGLGNYGRRENYCKRQVERWAKQYIAST
GEGKPERNPKMFELIDWLQQHIPLEDSSGGATGLVHGDFRLDNLVFHPIEDRVVGILDWE
LSTLGNQMCDVAYCSLPYITDLGVDKDQLGKGMEHTGLPEGIPSQAEYVAEYCSSSGKPW
PFAQWKFYIAFSLFRGASIYAGIYSRWTMGNAAGGESAQHAGDKANFLIDYAWAFVRRES
VLPEHPPSGSFVAQNCLKRLGQESEDQGFSEGGGKFVPSKRILELRKRLVKFMEDHIYPM
EKEFYKLAQSTSRWTVHPEEEKLKELAKKEGLWNLFIPFDSAARAKKLIFDGTNQLQSDD
TYNQLLGAGLSNLEYGYLCEIMGRSIWAPQVFNCGAPDTGNMEVLLRYGNKEQLLEWLIP
LLEGRIRSGFAMTEPQVASSDATNIECSISRQGDSYIINGKKWWTSGAMDPRCRLLIVMG
KTDFNAAMHKQQSMILVDIRTPGVHIKRALTVFGFDDAPHGHAEVLFDNVHVPAKNILLG
EGRGFEIAQGRLGPGRLHHCMRLIGAAERGMEIMAERALSRRVFGKLIAEQGSFRSDIAK
CRIELEKTRLLVLEAADQLDRLGNKKARGTLAMAKVATPNMALMVLDMAMQVHGGAGLSS
DTCLAHLWATARTLRIADGPDEVHLGTIAKLELQTAKAKL
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgagctcgacctcgacgccttgctccgctacgccgccgctaacgtcaccggc
tttcctccctcgccgtccaatttcaccgtctctaagttcgggcatggacaatcgaatccg
acttatctgatgcaagtaggatcgggagcgtcggtgaaacgctacgttttgagaaagaag
ccgccggggaagctgcttcagtctgctcatgctgtggagagagaattccaggttcttcaa
gcattgggtaatcatactgtagttccggttccgaaagttttctgtttgtgtactgatcca
agcgtgattggaaccgctttttacatcatggagtttttggaagggcgcatttttgtcgac
cccaggctaccgggtgtagagcctgcgagcaggagggctatttaccaagcgactgcaaaa
gctttagcatcgctgcattctgctgacgttgatgccattggactaggaaactatgggcgt
cgtgaaaactattgtaaacggcaggtagagaggtgggcaaaacaatatattgcctccact
ggtgaaggcaagcctgagagaaatccgaagatgtttgagctgattgattggttacagcag
catattccgcttgaagattcttcaggaggtgcaaccggcttagtgcatggggactttcgc
ctcgataatcttgtgtttcatcctattgaggatcgagtggttggcattcttgactgggaa
ttgtctactcttggaaaccaaatgtgtgatgttgcttactgttctttgccttacatcaca
gacttgggggttgacaaagatcaacttggtaaaggtatggaacatactgggcttccagaa
gggattccttctcaggcagaatatgtggcagaatactgctcttcatctggaaagccatgg
ccttttgctcagtggaagttttatatagcattttctttattccgtggcgcatcaatttat
gcgggcatctatagtagatggaccatgggtaatgctgcaggaggtgagagtgcccagcat
gcaggtgacaaagctaattttcttatagactatgcatgggcatttgttagacgagaatct
gtgcttcctgagcatcctccatcagggtcttttgttgctcaaaactgcttgaaaagattg
ggacaagagagtgaagatcaaggattttcagaagggggaggaaagtttgtccccagtaaa
aggattttagaattgagaaaaaggttggtcaagttcatggaagatcacatatatcccatg
gaaaaagaattctacaaacttgctcagtctacctcacgttggacagtgcatccagaggag
gagaagttaaaggagctcgcaaagaaagaaggcctatggaacttatttataccttttgat
agtgctgccagggcaaaaaaattaatttttgatgggaccaatcaacttcagtcagatgat
acctacaatcagttattgggcgctggtctttcaaaccttgaatacggatatctttgtgag
attatgggtcgttctatttgggctccacaagtgttcaactgtggcgcacctgatacagga
aatatggaggtcttgttgcgttatgggaacaaagaacaactacttgaatggcttattcct
ttacttgaggggagaatccggtcaggatttgcaatgacagaaccccaagttgcatcctct
gatgcaactaacatcgagtgttctattagtagacaaggagattcatatattatcaatgga
aaaaaatggtggacaagtggggctatggatccaagatgtagacttcttatagtcatggga
aaaaccgacttcaatgctgctatgcataaacaacagtctatgatcttagtggatatccgg
actccaggtgtacatataaagagagcacttacagtttttggctttgatgatgcacctcat
gggcatgcagaagttttatttgacaatgtacacgtcccagcaaagaatattctactggga
gaaggacgtgggtttgagattgcacagggtaggttaggcccaggaaggttacaccattgc
atgagactgataggagctgctgagcgaggcatggagataatggctgaaagggctcttagt
agaagagtttttgggaagttgattgctgaacaaggctcttttcgttctgatatagcaaag
tgtcgaatagagctagagaaaaccagattgttggttctggaggcagccgaccagcttgat
agacttggaaacaaaaaggcccgcggaactctagcaatggcaaaggtagcaaccccaaac
atggctctgatggtgctggacatggcaatgcaagtccatggcggcgctggcttgtcttct
gacacttgtctggctcatctttgggccacagcaagaacattgagaatagcagatggtccg
gatgaagttcacttgggtaccattgccaagttagaactacagacagctaaagccaaactc
tga
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