Rosa chinensis (China rose): 112197457
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Entry
112197457 CDS
T06020
Name
(RefSeq) SET and MYND domain-containing protein 4 isoform X1
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rcn04990
]
112197457
Domain-containing proteins not elsewhere classified [BR:
rcn04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
112197457
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_11
SET
TPR_9
TPR_BSK1_C
TPR_17
TPR_10
Motif
Other DBs
NCBI-GeneID:
112197457
NCBI-ProteinID:
XP_024193946
LinkDB
All DBs
Position
1:complement(61448564..61454342)
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AA seq
792 aa
AA seq
DB search
MEKLKSLVPETLKQMIAESTTDDLPSSCSSLLDFLLHFEPFQRMVNDLTDPEVALCGKNK
EGALESKQKGNRCFLSGDYANALNFYTQALRVAPMDAYEQDRKLVATLYVNRASVLHKMG
LVGECVRDCNRALRISSNYAKAWFRRGKANASMGKYEDAIRDLDVAKTAESSVGGKKQIE
SEMKIVLDQQYKAASPSTRHNQNNSNMLDEPHQMKLQCVTTPEKGKGLASTVDIPQASLV
HTEDPFATIILKHCRETHCHYCLNELPADKVPCTSCSIPWYCSQKCCIEAGGEMCCDYPN
NQSIHKYLPDNLQKYIVEATLIADSERDDQISEHKHECKGVPWPAVLPSEIVLAGRVLVN
SIIKRGGSTDSINLGEISDLSHHYSKMPPESKLELHIFSAVLSCCLQHCNGFEIPINGIS
ISQIVILISQIRVNSMTVVRMKFIDQHELVDQFGNLSSWEGGPTSNVEQVRVGQAIYASG
SLFNHSCRPNIHAYFLSRTLHIRTTEYVSAGCPLELSYGPQVGQWDCKDRIKFLEDEYSF
RCQCTGCSKMNFSDLVLNAFHCVKLNCSGIVLESSVINCEKEKLKHLPNIINTDSIVSLL
QAEELNIDDINKAANDMQINSFYQLNPGYCLKCGSYRDLESSSVAANNCIRRLQNSIDSK
NVSSTTLLGALSSLGVLRSTLHAYNRRIAEAEDNLAQAFCLVGELQPAMEHCKASIEILE
KLYNLNHIVIGYELVKLSSIQLSLRDSGAVDSIDRLYQIFSCYYGSHTDVIFPDLQFLRK
EGKTYFAKYQLT
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctgaagtctttagttcccgagaccctaaagcaaatgatcgcagagagcact
actgacgatctgcccagctcgtgttcttctctcctcgacttccttctccatttcgagccg
ttccagcgaatggttaatgacctgacggacccggaagttgcgctgtgcgggaagaataaa
gagggtgctttggagagtaagcaaaaggggaataggtgcttcttgagtggtgattatgct
aatgctttgaatttctatacccaggcattgcgagttgctccaatggatgcatatgaacaa
gaccgaaagttggttgctaccttgtatgtgaaccgggcttctgtattgcataaaatgggg
cttgtgggggagtgtgtaagagactgcaaccgggcgcttcggatttcttcaaactatgcc
aaggcatggtttagaagaggcaaggcaaatgcatctatgggaaaatatgaggatgcaata
cgggacttggatgtagcaaagactgcggagtcatcagttggtgggaagaaacagatagaa
agtgagatgaagatagttttggaccaacagtataaagccgcaagtccatcgacacgacat
aatcagaataactcaaatatgttggatgaaccacaccaaatgaaattacaatgtgtcacc
acacccgagaaaggaaagggtttggcttccacggtggacattcctcaagcatccttggta
cataccgaagacccttttgcaacgataatattaaagcattgccgggaaacacattgccac
tattgcttgaatgaactaccagcggataaagtcccatgtacatcatgttcaataccatgg
tattgctcccagaaatgctgtatagaggcaggaggagaaatgtgctgcgattacccaaac
aatcaaagcattcataagtatctaccagacaaccttcagaagtacatcgtggaggccact
ttaattgctgattctgaaagagatgatcagatttctgaacataagcatgaatgtaaaggt
gtaccctggccagcagtattgccttctgagatagttttggctggtcgagtactagtcaac
tctataatcaaaagaggaggttccacagatagtattaatctcggagaaatttcggatctt
tctcatcattattcaaaaatgcctccagaatcgaaattggaattacatatattctctgct
gtattatcatgctgtctgcaacattgtaatggctttgaaataccaataaacgggatctcc
atttcacagattgttatacttatatcccaaattagggtgaactctatgacagttgttcgt
atgaaattcattgaccagcatgaactagtagatcagtttggaaatctgtcatcttgggaa
ggaggtccaaccagtaatgtggaacaggtcagagtaggtcaagctatctatgcatcagga
agcttgttcaaccattcttgtcgacctaacatccatgcttatttcctttcacgcactctt
catatacgaactacagaatatgtctcagcagggtgtccccttgagttgtcctatggtcca
caggttgggcagtgggattgtaaggacaggattaagtttctggaagatgagtactcattt
cgatgtcagtgcaccggttgttcaaaaatgaacttttcagacttagtgctaaatgcgttt
cactgtgtgaagctgaactgttctggcatagtcttggagagttctgttattaactgtgaa
aaagagaaacttaagcacttaccgaacatcatcaacactgacagcatcgtctctcttctt
caggctgaagagctcaatattgatgacatcaataaagctgcaaatgatatgcaaatcaat
agcttttaccagttaaatcctggctactgtctaaaatgtggttcttatcgtgatctagaa
tcttcctctgtagctgcaaataactgtatcagaagattacagaattcaatagactcaaaa
aatgtctctagtaccacgcttttgggtgctttaagttctcttggtgtgctgagatcaact
ttgcatgcatataatagaagaattgcagaggcagaagataatcttgcacaagcattttgt
ttggtcggagagttgcaacctgcaatggagcactgtaaagcatcaattgagatcctggaa
aagctctataaccttaatcacattgttattggatatgaacttgtgaagctctcatctatc
cagttatcattgcgtgacagtggtgccgtggacagcatagatcgactctatcaaatattt
tcatgttattatggatcacatacagacgtcattttcccagatcttcaattcctcagaaaa
gaggggaagacctattttgccaagtatcaactcacatga
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