Rosa chinensis (China rose): 112197506
Help
Entry
112197506 CDS
T06020
Name
(RefSeq) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112197506
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rcn01007
]
112197506
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112197506
Enzymes [BR:
rcn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
112197506
Amino acid related enzymes [BR:
rcn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
112197506
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112197506
Prokaryotic type
112197506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
FliH
ACCA
Motif
Other DBs
NCBI-GeneID:
112197506
NCBI-ProteinID:
XP_024193988
LinkDB
All DBs
Position
4:66650605..66658448
Genome browser
AA seq
1012 aa
AA seq
DB search
MSGFLGKGVIAFNPLLLLGRYPFSFAPSHLPRNRNRNRSLTTAKHLASIATSSFRPKMPG
VESQGGGLEWPAQRVRDTFLEFFRDEKKHEYWKSSPVVPHNDPTLLFANAGMNQFKPIFL
GTADPNTGLSKLTRACNTQKCIRAGGKHNDLEDVGKDTYHHTFFEMLGNWSFGDYFKSEA
IEWAWKLLTQVYKLPEDRFYATYFGGDEKLGLAPDYEARDLWLKFLPPGRVLPFGCKDNF
WEMGDTGPCGPCTEIHYDRVGNRDAASLVNYDDPTCLEIWNLVFIQFNRESDGSLKPLPA
KHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGDDDTDKVDMAY
RVVADHIRTLSFAIADGSRPGNDGREYVLRRILRRAVRYGREVLKAQEGFFNGLVPVLAA
LMGDVFPELKQHEAGIREIIKEEEEAFGKTLIKGIEKFKKAAQDVQGKTFSGQEAFVLWD
TFGFPLDLTQLMAEEQGLEVDVEGFNVAMDEARERSRNAQNKEEGGAIVMNAEATASLHK
SGIAATDDSFKYIWFQDHESVIKAIYTGSEFMDNVAAGSLVGVILESTSFYAEQGGQIFD
TGSLKGETGSFQVRNVQIFGGFVVHIGSFSGEHGKLSVGDKVVCKVDYKRRTLIAPNHTC
THMLNFALREVLGSHVDQKGSIVLPEKLRFDFSHGKPVDPEQLRRIESIVNEQIKAELDV
SVKEVALVEAERINGLRAVFGEVYPDPVRVVAVGRKVEDLLSDPKNEEWSSISTEFCGGT
HITNTREAEAFALLSEEGTAKGIRRITAVTTNAAFDAIKLADSLEQEVIEASKAEESLLE
KKIASFKSRLDAAQIPAAKKADIRDKIAQLQNKVRKAQKKIAEQNLQKAVKVAREMAEVA
ASDGKSFCVSHVDVGLDTAAVREAVCKVIEKGMPAMVFSMDETTNKAVVCAGVPGDKGKQ
LEVSEWLTAAMGPLKGRGGKGKGGLATGQGTDASHLNEAIDLATTFAQMKLS
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgagtggattccttgggaaaggagtgatagcgttcaaccctcttcttctactcggacgt
taccctttctctttcgcgccgtcacacctccctcggaatcggaatcggaatcgctccctc
accaccgccaagcacttggcttcaatcgcaacgtcgtcgtttcgtcccaagatgcccggc
gtcgaatctcagggaggaggactagagtggccggcacagcgcgtgcgggacaccttcctc
gagttcttcagggatgagaagaaacacgagtactggaagtcaagcccggtcgtcccccac
aacgacccaactcttctctttgctaatgctggaatgaaccagtttaagcccatttttttg
gggacggcggacccgaatactgggctaagcaagctgactagagcatgcaacacgcagaaa
tgtataagggcaggagggaagcataatgatctcgaagatgtagggaaagacacctaccat
cacacttttttcgagatgcttggtaattggtcgttcggggactatttcaagagtgaagcc
attgaatgggcttggaagcttctcactcaggtttataagctgccagaagatcgattttat
gccacttattttggtggtgatgagaagctgggtcttgctcctgattatgaagctagagat
ttatggcttaagtttctaccgcctggacgtgtactgccttttggctgtaaggataacttt
tgggagatgggtgatactggtccttgcggcccttgcactgagatccattatgatagagtt
ggtaaccgggatgctgcatcattagtcaactacgatgaccctacctgcctcgagatctgg
aaccttgtctttattcagttcaatagggaaagtgatggctctcttaaaccattgcctgct
aagcatgttgacactgggatgggctttgaaagattgacttctgtacttcagaacaagatg
agcaattatgacactgatgtcttcatgcctatatttgatgctattcagcaggctacaggg
gctcgcccatattctgggaaagttggagatgatgatacagacaaagttgacatggcttac
agggttgttgcagatcatataagaactctttcatttgccattgctgatgggtcccgtcca
ggcaatgatggtcgtgaatatgttctgagacgtattctccgtcgagctgtccgatatgga
agagaagtgctaaaagctcaagaaggatttttcaatgggcttgtaccggtgttggcggca
ctgatgggtgatgtatttccggagctaaaacaacatgaagcaggcattagggagataatc
aaagaggaggaagaagcatttggcaagactctaattaagggaatagaaaaattcaaaaag
gcagctcaagatgttcaaggcaaaacatttagtgggcaggaggcttttgtcttgtgggac
acatttgggttcccgttagatttgactcagttgatggcagaggaacagggattagaagtt
gatgttgagggtttcaatgtcgctatggatgaggctcgagaaagatcaaggaatgctcaa
aataaggaagaaggtggtgccattgttatgaatgctgaagctactgcttcattgcacaag
agtggaattgctgcaacagacgacagcttcaaatatatttggtttcaggaccatgaaagt
gtaattaaagcaatttacactggttcagagtttatggataatgttgctgctggcagctta
gttggtgttattttggagtctacaagtttctatgcagagcaaggtggacagatatttgat
actggatcactaaaaggagagaccggctcatttcaagtccgcaatgttcaaatttttgga
ggttttgttgtccacattggttccttctctggagagcatggcaaactctctgtgggtgac
aaagtggtttgtaaggttgactataaaaggcgtacactcattgcgcctaaccatacttgc
acacacatgttgaactttgctctgagggaagttcttggcagtcatgttgaccagaagggt
tccattgttcttcctgaaaaattgagatttgatttttctcatggtaagccggtggaccct
gaacagttgagaagaattgaatcaattgtgaatgagcaaataaaagctgaattagatgtt
tctgttaaggaggtagccctggttgaagctgagcgcatcaatggtttaagggctgtattt
ggagaggtctatcctgacccagtaagagttgtggctgttgggcgaaaagttgaggacctc
ctgtctgaccctaaaaatgaggaatggtcatcaatatcaacagaattttgtggagggacc
catataacaaacacacgtgaagctgaggcctttgcccttttatctgaagagggaactgct
aagggaatccgaaggataactgctgtcacaactaatgctgcttttgatgcaattaaattg
gcagattcacttgagcaggaagtaattgaagcttccaaggctgaagagagcttgctcgag
aagaagatagcttcctttaaatctcgcctagacgcagcacaaattccagcggctaagaaa
gctgatatcagggacaagattgcccaacttcagaacaaagtgagaaaggcacagaagaag
attgcagagcaaaatttacagaaagctgtcaaggttgcaagggagatggcggaagttgct
gcatcagatgggaagtctttctgtgtatcccatgttgatgttggtttggatactgcagca
gttcgtgaagcagtttgtaaagtcatagagaagggaatgcctgcgatggtttttagcatg
gatgaaacaacaaataaggctgtggtgtgtgctggagtaccaggagacaaaggcaagcaa
ttggaggtgtcagagtggttgactgcagctatgggtcccctgaaaggaaggggtggtaaa
ggaaaaggtggccttgctactggccagggaacagatgcatctcatctaaacgaggcaata
gatctggcaaccacttttgcgcagatgaaattgagttga
DBGET
integrated database retrieval system
