Rosa chinensis (China rose): 112197539
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Entry
112197539 CDS
T06020
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112197539
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112197539
Surveillance factors
Other surveillance factors
112197539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
DUF6293_C
Motif
Other DBs
NCBI-GeneID:
112197539
NCBI-ProteinID:
XP_024194034
LinkDB
All DBs
Position
4:54410651..54417934
Genome browser
AA seq
1604 aa
AA seq
DB search
MAERKLDLPDDLLSSKPSDQSWTSKVEVSGGNDEEKVLMGSSDELKDPAALDSSIPLSPQ
WLYAKPIESKLEMRGPTSIGNSTDSNQKDGWRLEGSEDKKDWRRPATESESSRRWREEER
ETSLLGGRRDRRKTERRADNISLRDTADSRALPTTDRWHDGRNEVRRDSKWSSRWGPEDK
EKEPRSEKRTDVEKDDAHSNSESQSLGANNRSAAESDSRDKWRPRHRMEVQTGGSATYRA
APGFGQERGRVEGSNLGFTLGRGRSSGIGRSAGTIGSALSGKSEGVPGKPRHSADGFCYP
RGKLLDIYRQRKPELSFDTMPDEMEEAPSLTQVDFVEPLAFHAPDADEEAILSDIWKGKI
TSSGVVYNSFRKGRSTENITGVGDLEAADGVLGNLPSTVTQETSTFQEAANADDYGTLWN
YGSQRNVINGKDVGHKENDNRATEGKDLDGVSLSTQKSNGIYGDVETDGSYDSANQLHLG
GNRKIGDPAFSNHPVSDDIEFANYSEIRSNLPDVPNTLYGLASSEQNENSNPRVKELEMG
VHPEGLYYYYLDPQGVTQGPYQGLDIISWFEQGFFGIDLLVRLEDAPEGTPFKELGEFMP
YLKSWDENGSIINPSSKLEESGGLGGSLESSLPFSAAVSDSNYAFLGNDHQRPMPELNSL
SAQHIQPRISEPEAPLQLHSRGQSFNDFVEQDEDIVFPGIHGTAAYSTARSSGSIHDSMA
NSINHLPPPTEMTESGVPIQNDNKLHPFGLLWSELESGQSKHSKSANMPSSKGRAVPFGA
NPDPAIAETWSDLHRKSSVSDPNLYQEMLTPRQLSHMEQEPSHYDLAEQLMSQQIRQQQQ
LQQRNMLSGFAHLNDNVLDPLQNQNLIHHQQLANHSAADLDHLLALQRQAQLEQHQLQQQ
QQFHQQQKLLQEQQQSQVQQVLFEQLLRGQMHDPTLRQPHVDPVRANNVIDQVLLEQQLL
RELQQRSHHLPRHVDPTIEQLIQAKFGHTPQGHQTDLFELLSRAQHEQIQSLEHQMHARQ
LPMGIRQRMEEERHIGSVWPAEESNQIFRTHAGNHGHRGHSSGFNPLDFYQRQQRPSHEE
QLNHLDRNLSLQDRLQQGFYEPGSLPFERSMSLPAGAPGMNLDVVNAMARAQGLDMQDSI
GRMQSAGQSGQFSSGIPSHSAHHPHVPNQFHVSHLDAIEGHWPEKNDQLENDWMDARFQQ
LHINAERQKRESEIKNTSQDQNLWMSDGINDENSKRLLMDLLHQKSGHQPSESLNAMSNG
MFSDKRLPSGHYSGSSSSNHLFNLHADQEAGLNNSFRVGSFGSNPGELLQEEQASSVESN
EKLMYGSNSGALADRESFLAGMNATSQSLYTNSNMISKSSIGKELSELEGRKRGSKSEGI
IMGRSFETQERMVEQAGLSATNFEEMSKHAHSMNSSSGVSGGNAGFYGDKIGGSNSFVEQ
TGKDRAPIPSKGQENILLRRPSVPSASASQEGLSELISDPVLRGKNSSAASDGARRDAVV
NPVNQGSDVMASSKKEMHFRRTSSASDTDVSEASFIDMLKSNTKKIAPMDAHATAGFAES
SEAMQGGRSGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRIDD
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacgcaagctcgatctccccgacgatctcctctcctccaaaccctccgatcag
tcctggacctccaaagttgaagtttctggaggaaatgatgaggaaaaggtgcttatgggg
tcatctgatgagttgaaagatccagcagccttggatagcagcatacctttgtcaccccag
tggctttatgccaagccgattgagtctaagttggaaatgcgtggtccaacttcaattgga
aactccactgacagcaaccagaaggacggttggcgattggaaggatctgaggacaagaaa
gattggaggcgacctgctactgaaagtgaaagtagccgtcgttggcgtgaagaggaaaga
gaaactagcttgcttggtggtagaagagatcgtaggaaaacagaacgccgtgctgacaat
atttcattgagggacacagctgacagtagagcattgcctacaactgacaggtggcatgat
ggccgcaatgaagtacggcgtgatagcaaatggtcgtctaggtggggtcctgaagacaaa
gaaaaggagccccgaagtgagaagagaacagatgtggagaaggatgatgctcacagtaac
agtgagagtcaatctcttggagctaacaaccgttcagctgctgagtcagattctcgggat
aaatggaggccacgacatagaatggaggttcaaactggggggtcagctacttaccgtgct
gcacctggatttggacaagaaagaggacgggtggagggttcgaatttgggatttaccctg
gggcgaggaaggtcaagtggtattgggagatccgcaggcactattggctctgctctttca
ggaaagagtgaaggtgtccctgggaaaccaaggcactcagctgatggtttttgctacccg
aggggaaagcttcttgatatttatcggcagcgaaagcctgaactctcttttgataccatg
ccagatgagatggaggaggccccctcactaactcaagttgattttgttgaaccattggct
tttcatgcccctgatgctgatgaggaggccatccttagcgatatatggaagggaaaaatt
acaagtagtggggtagtatacaattcattcagaaaggggagatcaactgaaaatattaca
ggtgtgggagacttagaagctgctgatggagttctgggcaatttgccctcgactgtcact
caagagactagcacctttcaggaggctgcaaatgctgatgactatgggactttgtggaat
tatggttcacagaggaatgtgataaatggaaaagatgttggtcataaagaaaatgataac
agagctactgaaggaaaggaccttgatggagtttccctatcaactcaaaaaagtaatggt
atctatggtgatgttgagactgatggttcttacgatagtgcaaatcagcttcatcttggt
ggcaataggaaaattggagatcctgccttttcaaatcatcctgtatctgatgacattgag
tttgccaattattccgaaataagatccaaccttcccgacgttccaaatactctctatggt
ttggcctcttctgagcagaatgagaatagcaaccctagagtgaaagagttagaaatgggt
gttcatcctgagggtttgtattactactaccttgatcctcaaggggtgacccaagggcca
tatcaggggttagacatcatttcatggtttgaacaaggtttctttgggatagacttgctt
gttcgcttggaggatgctcctgaaggaacacctttcaaagagttgggggagttcatgcca
tatcttaaatcttgggatgagaatggcagtatcataaatccaagttctaagctagaagaa
tctggtggcttaggagggagtctggagtccagtttacccttttctgcagcagtttcagac
agtaactatgcatttctgggaaatgaccatcagcggcccatgcctgaactaaacagcctt
tcagctcagcatattcagccaagaatttccgagcctgaagctccactacaactacattca
aggggtcaaagctttaatgattttgttgaacaagatgaagatattgtgtttcctggaata
catggaaccgctgcctattctactgcacgatcttctgggagcatacacgattctatggca
aactctattaatcaccttcctcccccaactgaaatgacagaatctggtgtgcctattcag
aatgataataagttgcatccctttggcttgctatggtctgagctagaaagcggccaatca
aagcattccaagtcggccaatatgccatctagtaaggggagggctgttccatttggtgca
aatcctgatccagcaattgctgagacgtggtctgatcttcatagaaaaagttcagtctct
gatccgaacttgtatcaggaaatgttgactcctcgccaattatcgcacatggaacaggaa
cccagtcattatgatttagcagagcagcttatgtcgcagcaaattcgacagcagcagcaa
ctccaacagcgaaatatgttgtctggttttgcacacttgaatgacaatgtattagatcct
ttgcaaaatcagaatcttattcaccatcaacagttagccaaccattctgcagcagatctg
gatcaccttttggcacttcagaggcaggctcagctcgagcaacatcaactgcaacaacag
cagcagtttcatcaacagcagaagcttttacaggagcaacagcaatcacaagtacaacag
gtgctttttgaacaattgttgcgtggtcaaatgcatgatcctacacttaggcagccacat
gttgatcctgtaagagcaaacaatgttattgatcaggttctattagagcagcagcttcta
cgtgaacttcagcaacggtctcaccatcttccaaggcatgttgatccaactatagagcag
ttaattcaagcaaagtttggtcatacacctcaaggacatcaaacagatttgtttgagcta
ctgtctcgtgcacagcatgaacagattcagtcgctggaacatcagatgcatgccaggcag
ttacccatgggaataaggcagcgaatggaagaagagaggcatatcggttctgtctggcca
gctgaggaatcaaatcagattttcaggacccatgctggtaatcatggtcaccgagggcac
tcttctggctttaatcctttagatttttatcagaggcagcagaggccatctcatgaggag
cagctgaatcaccttgaccggaatctttcattacaggatcgacttcagcaaggtttttat
gagcctggctcactgccgtttgagcggtcaatgtcattacctgctggtgcaccagggatg
aacttggatgtagtaaatgctatggctcgtgcccagggtttagatatgcaggattccatt
ggacgtatgcagtcggctggccagtcgggtcaattttcgtctggaatcccttcccacagt
gctcatcatcctcatgttcctaaccaatttcatgtttcacatttggatgcaattgaggga
cactggcctgagaagaatgatcagcttgagaatgactggatggatgctcggtttcagcag
ctgcatattaatgctgagaggcagaaaagggaatcagagatcaagaatacttctcaggat
caaaatttatggatgtcagatggaattaatgatgagaactcaaagagactactaatggat
ttactccatcaaaaatctggccatcaacctagcgagtcgttgaatgcgatgagcaatggg
atgttctctgataaaagactgccatctggccactactctggatcaagctcctcaaaccac
ctgttcaatctccatgcagaccaagaagcaggtctaaataactcatttcgtgtagggtca
tttggttctaatccaggtgaactcctacaggaagagcaggccagcagtgtggaaagcaat
gaaaagttgatgtatggatctaattctggagcattggctgatagagagtcatttctggca
ggaatgaatgcaacgagccagtcactttacacaaattctaacatgataagtaagtcttct
ataggtaaagaactttctgagttggagggcaggaagcgggggtccaaaagtgaggggata
attatgggtcgatcttttgagactcaagaacgaatggttgaacaagcagggttgtctgca
acaaattttgaggagatgtcaaaacacgctcatagcatgaattcttcctccggtgtttca
ggtgggaatgctggtttttatggtgacaagattggcggaagtaattcatttgtcgaacaa
actggcaaggatcgggctcccatcccatccaaagggcaagaaaatattctgctgagacga
ccttctgtcccaagtgcttcagcatcgcaagaaggattatcagaactgatatcagatcca
gttcttagaggaaaaaattcgagtgctgcttcagatggggcaaggcgagacgcagtggtt
aatccagtaaaccaaggttctgatgtcatggcatcttcgaaaaaagaaatgcatttccgc
cgtacatcatccgccagtgatactgatgtatcagaggcatcatttatcgatatgcttaag
agtaataccaagaagattgctcccatggatgcccacgccacagctggatttgcagaatca
tcagaagcaatgcaaggtggccggagtggcaaaaagaaaggaaagaaagggaggcaaatt
gatcctgccctccttggttttaaagtcaccagcaatcgtataatgatgggtgaaattcaa
cgaatcgacgattag
DBGET
integrated database retrieval system
