Rosa chinensis (China rose): 112197562
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Entry
112197562 CDS
T06020
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112197562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcn03021
]
112197562
03036 Chromosome and associated proteins [BR:
rcn03036
]
112197562
Transcription machinery [BR:
rcn03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
112197562
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
112197562
RSF complex
112197562
WICH complex
112197562
B-WICH complex
112197562
NORC complex
112197562
BRF complex
112197562
NuRF complex (fruit fly)
112197562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
HDA2-3
DBINO
Myb_DNA-binding
CHDII_SANT-like
AAA_14
Motif
Other DBs
NCBI-GeneID:
112197562
NCBI-ProteinID:
XP_024194061
LinkDB
All DBs
Position
4:46953730..46961522
Genome browser
AA seq
1070 aa
AA seq
DB search
MARAPKPQVSSDEALSNSEEEEPINEEEDEEELEAVARPADSDDEDAAEDNSRGSDDEAA
PVENDDDFEEEDGGNESNAEVSKREKARLKRMEQMKKQKIQEILDAQNAAVDADMNNRGK
GRLQYLLQQTELFAHFAKGDPSASLKKVKGRGRHASKKTEEEEDEECLKEEEDGLSGTGT
TRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFR
GITGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERKHIREELLVAGKFDVCVTS
FEMAIKEKSCLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHE
LWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPP
KKETILKVGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEP
GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFKGYLYCR
IDGNTGGEDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQ
AQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDEL
LQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAEL
YDFDDEKDEKFDFKKIVSENWIEPPKRERKRNYSESEYFKQTMRQGAPAKPKEPRIPRMP
QLHDFQFFNTQRLSELYEKEVRYLMQNHQKNQLKDTTIEVDEPEEVGDPLTAEELEEKER
LLEDGFSSWSRRDFNTFIRACEKYGRSDIQSIVAEMDGKTEEEVERYAKVFKERYKELND
YDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKILYGQNKGKLYNEECDRFMI
CMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEVDERE
RQARKEKKLAKNMTPSKRGTGRQPTESPSSLKKRKQLTMDDYVSTGKRRR
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagccccgaagccccaggtctcttccgacgaagccctatccaattccgaggag
gaggagccgatcaacgaggaagaggacgaggaggagctcgaggccgtcgctcggcccgcc
gactccgacgacgaggacgccgccgaggacaactcccgaggctccgatgacgaggccgcg
ccggtcgagaacgacgatgactttgaagaagaggatggaggtaatgaaagcaatgctgaa
gtgagcaaacgcgagaaggccaggcttaaacgcatggaacaaatgaagaaacaaaagatt
caggaaatattggatgcacaaaatgcagctgtggatgctgacatgaacaatcgagggaag
ggtcggttgcaatatcttctgcagcaaacggagttgtttgcccattttgccaaaggtgac
ccgtctgcatccctgaagaaggtgaagggaagggggcgccatgcttcaaaaaagactgaa
gaggaagaggatgaagaatgcctaaaagaggaagaagatggtttatctgggaccggaacg
acacggctattgacgcaaccttcctgtattcaggggaagatgagggattaccaacttgct
ggattaaactggctcatacgcctctatgaaaatggcataaatggaatccttgcagatgag
atgggtcttggtaaaactttgcaaaccatatccttgttgggttacctgcatgaattcaga
ggaataactggccctcatatggttgtggctccaaagtcaacccttggaaactggatgaat
gagattcggcgtttctgtcccattttgcgtgctgtgaagtttcttggtaatcctgatgaa
agaaagcatatacgggaggaattgctggttgctgggaagtttgatgtttgtgttacaagt
tttgaaatggccatcaaagagaagtcttgcttacgccgtttcagctggcgttatataatc
attgatgaagcccatcgaatcaagaatgagaattcacttctttcgaaaacaatgaggctg
tataataccaactaccgccttctaatcacgggcacaccacttcagaataatcttcatgaa
ctatggtctctgcttaactttcttctgccagagatatttagttctgctgaaacttttgat
gaatggtttcaaatatctggtgaaaatgaccagcaggaggttgttcaacagcttcacaag
gtcctccggccattccttctccgaaggttgaagtcagatgttgagaaaggtttacctcca
aaaaaagaaacaatactcaaggtaggcatgtcacaaatgcagaaacagtactataaggct
ttactgcagaaagatcttgaagttgttaatgctggtggagaacgtaagcggcttctgaat
atagctatgcagcttcgtaaatgctgtaatcatccatatctcttccaaggtgctgagcct
gggcctccttatacaactggagaccatcttatcacaaatgctggtaaaatggtgcttttg
gacaagttacttccaaagttaaaagagcgtgattctagggtcttaatattttcacagatg
acaaggctgctagatattctcgaagattatttaatgtttaaaggatacctttattgtcgg
attgatggaaatactggtggtgaagaccgtgatgcttccatcgatgccttcaataagcct
ggaagtgagaaatttgtattcttgctatcaaccagagctggaggacttggtatcaatctt
gctactgcagatgtcgttattctttatgatagtgactggaaccctcaagttgatttgcaa
gcacaagatcgtgctcacaggattggtcagaagaaagaagttcaagtgttccggttctgc
actgagtataccattgaggaaaaagtgattgagagggcttataaaaagcttgcccttgat
gctttggtgattcaacaaggacgattagctgagcaaaaaactgttaataaagatgagcta
cttcaaatggtgaggtttggtgctgaaatggtttttagttccaaggacagcacaattacc
gatgaggacattgatagaatcattgcgaaaggagaagaggcaactgctgagcttgatgca
aagatgaagaaatttactgaggatgcgattaaatttaagatggatgatactgctgaattg
tatgactttgatgatgagaaggatgagaagtttgacttcaagaagattgttagtgaaaac
tggattgaaccaccaaaaagagagcggaagcgcaattactcagaatcagaatactttaag
caaacaatgcgccaaggtgctccagcaaaacccaaagagcctcgaattccacgcatgcct
caattacatgattttcaatttttcaacacacaaaggctgagtgagctgtatgaaaaggaa
gtacgctacctcatgcaaaatcatcagaagaatcagttgaaagacacgactatagaagtg
gatgaaccagaagaagttggagatccattgactgctgaagagctggaagaaaaggaacgt
ctattagaagacggattctcttcgtggagtagaagagatttcaataccttcatcagggcc
tgtgagaagtatgggcgaagtgacatacaaagcattgttgctgagatggacgggaaaaca
gaggaggaagttgaaagatatgctaaggttttcaaagagagatacaaggaattaaatgat
tatgataggatcattaagaacattgaaagaggagaggctagaatctctcgtaaggatgag
ataatgaaagctattgggaagaagttggatcgttacaagaatccatggctagaactgaag
atcctttatggtcagaacaagggaaagttgtacaatgaagaatgtgaccgtttcatgata
tgcatggttcacaagcttgggtatggaaactgggatgagttgaaagcagcatttcgcacg
tcacctttgtttcgttttgattggtttgtgaagtcgcgcacaactcaggaacttgctagg
aggtgtgatacattaattcgattggtggagaaagagaaccaagaagttgatgaaagggag
agacaagctcgcaaagagaagaagcttgctaagaacatgacaccatcaaagcgtggtacg
gggaggcagccaactgagagcccctcttctttgaagaagaggaagcaattaactatggac
gattatgttagcacgggaaagaggaggagatga
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integrated database retrieval system
