Rosa chinensis (China rose): 112197633
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Entry
112197633 CDS
T06020
Name
(RefSeq) chloride channel protein CLC-d
KO
K05016
chloride channel 7
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcn01009
]
112197633
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112197633
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112197633
Protein phosphatases and associated proteins [BR:
rcn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112197633
Membrane trafficking [BR:
rcn04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
112197633
Ion channels [BR:
rcn04040
]
Chloride channels
Chloride channel (CLC)
112197633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
112197633
NCBI-ProteinID:
XP_024194154
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All DBs
Position
4:complement(41869996..41877184)
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AA seq
793 aa
AA seq
DB search
MLSNHLQNGIEAPKLAWSRLPNSDEAETDVFVLGKKDDEGAGVESLDYEVIENYAYWEEQ
AQRGRLYVGYYVAVKWFFALLIGIGTGLAAVFINISVENFAGWKFALTFAIIQKSYLAGF
VVYILINLVLVFSSVYIVTQFAPAAAGSGIPEIKGYLNGVDIHGVLLFRTLIGKIFGSIG
SVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLRSRWLQIFNSDRDRRDLVTCGCAAG
VSAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGKCGHFGSG
GFIIWDVSDGQEDYSFEEFLPMAVIGVIGGLLGALFNQLTFYIAHWRRNYLHKKGNRVKI
IEACLISLITSIISFGLPLLRKCSQCPEADPDSGIECPRPPGMYGNYVNFYCSKEREYND
LATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFGTAVPAGQFVPGIMI
GSTYGRLVGMFVVSFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLP
LIMLVLLISKAVGDAFNEGLYEEQSRLRNIPQLESKPKYQMRKMTAKEACGRRVISFPRV
VKVADLVSILRSNIHNGFPVIDHSRNGETLVIGLMLRSHLLVLLQSKVDFQHSPLPCDPR
GSRSIRHTLSEFVKPATSKGLSIHDIHLSSDDLEMYIDLAPFLNPSPYIVPEDMSLTKVY
NLFRQLGLRHIFVVPRPSRVIGLITRKDLLIEENEDSASMELQSTSVRAQHRDRRKGRRI
GDMEHPLLTGLLS
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgaatcacttgcagaatgggatcgaggcgccgaagctggcctggtctcgcctc
ccgaactcggacgaggccgagaccgacgtctttgtgttggggaagaaggacgacgagggc
gccggcgtcgagagccttgactatgaagtcatcgagaactacgcttattgggaagagcag
gcgcagagagggagactctatgttggatattatgtggctgtcaagtggttctttgctttg
ctcatcggcatcggcactggattagctgctgttttcatcaatatttcggttgagaacttt
gcaggctggaaatttgcattgacatttgctataatacaaaaatcatatctggccggtttc
gtggtgtacatattaatcaacttagttttggttttttcctctgtatatattgttacacaa
tttgcaccggcagcagctgggtctggtattccagaaatcaaggggtatttaaatggggtc
gacatacacggtgtcctacttttcagaacattgattggaaagatatttggtagcattggt
tcagtgggaggaggtctagctttaggcaaagaaggtcctcttgttcatactggtgcttgt
attgcatccttgcttggacaaggtggatctacaaaataccatctcagatccaggtggcta
caaatttttaatagtgaccgagatcgccgtgatcttgtaacctgtggatgtgcagctgga
gtttctgctgctttcagagctcctgtaggtggtgtactatttgcactggaagaagttaca
tcttggtggaggagtcaacttatgtggcgtgtgtttttcacttctgctattgtggccgtt
gtagtgcgtactgcaatgggatggtgcaagagtggaaaatgtggacattttggctcaggt
ggcttcataatatgggatgtatcagatggtcaagaggactattcttttgaggagttcttg
ccaatggcggttattggggtcattggaggtttactgggagccttgtttaaccagcttaca
ttttacattgctcactggcgccgaaattatttgcacaagaaagggaatcgagtcaagata
attgaagcgtgtctcatctctctgataacgtcaattatttccttcggtttaccactttta
agaaaatgtagtcaatgccctgaagcagatccagattctggaattgaatgcccgcggcct
ccaggaatgtatggaaattatgttaatttttattgcagcaaggaaagggaatacaatgat
cttgcaactattttcttcaatactcaggatgatgcgatcaggaatttgtttagtgcaaaa
acaatacatgagtacagtgcccaaagtttattgaccttcttggtgatgttttacacatta
gcagttgtgacatttggtactgctgttccagctggtcaatttgttcctggaataatgata
ggatcaacatatggacgtcttgtaggcatgtttgttgttagcttctacaagaagctcaac
attgaagagggaacatatgcactacttggagcagcttcttttcttggaggttcaatgcga
atgacggtgtctctatgtgtcattatggttgaaatcacaaataatctgaaattgttgcct
cttatcatgcttgttcttctcatttcaaaggctgttggagatgcattcaatgaaggcctg
tatgaagaacagtcgcggttaaggaacattccacaattagaatcaaaacccaaatatcaa
atgcggaagatgacagcaaaggaggcttgtggaagaagggtgatttccttccctcgtgtt
gttaaggttgcagatttggtttctattctacggagcaacatccacaatggcttccctgtg
attgatcattctagaaacggagaaacacttgtcattggactaatgcttcgtagtcacttg
ttggtacttctgcagtcgaaggtagatttccagcatagccctttgccgtgtgatcccaga
ggatctaggtctatcaggcacactttgagcgagtttgtgaaacctgctaccagtaaagga
ttatcaatacatgatatacatctgagctcagacgacttggaaatgtacatagatcttgcc
ccctttttaaacccatctccttacatcgtccccgaggatatgtctttgacaaaggtatat
aatcttttccgtcagctaggtctgagacacatatttgttgttccgcgcccatctcgtgtg
attggtttgattaccagaaaggatttattgattgaggagaatgaggattctgcttcaatg
gaactccaatcgactagtgtaagagcacaacatcgtgatagaagaaagggtaggaggatt
ggtgatatggagcacccgctactcactggtcttctgtcgtga
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