Rosa chinensis (China rose): 112197689
Help
Entry
112197689 CDS
T06020
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcn03036
]
112197689
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
112197689
REST complex
112197689
Heterochromatin formation proteins
Other heterochromatin formation proteins
112197689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
112197689
NCBI-ProteinID:
XP_024194226
LinkDB
All DBs
Position
4:complement(65497604..65506463)
Genome browser
AA seq
1441 aa
AA seq
DB search
MKRSRDDGYTSSQVKRPMVTSRGEPSGQPQMMTATASQKLTTNDALSYLKAVKEIFENNK
EKYEDFLEVMKDFKAQRVDTSGVIQRVKDLFKGHRDLILGFNTFLPKGYEITLPLDDEQP
PQKKPVEFEEAISFVNKIKTRFQHDDHVYKSFLDILNMYRKENKSISEVYQEVSALFQDH
PDLLVEFTHFLPDTSATASTQFAPSQRNSMLRDRSSAMPPMRQMHVDKKERPMGSYPEHD
LSVDRPDLDHDRALMKAEKEQRRRGEKEKERREDRERRDDRDFDHDGSRDFNMQRFPHKR
KSTRRGEDLATDQLHQGGEDDENLGAHLISSSYDDKNSAKSIYGSESAFCEKVKEKLRNP
DDYQEFLKCLHIYSKEIITRAELQSLVGDLLGKYPDLMDGFNEFLSCCEKKDGFLAGVMS
KKSLWNEGNLPRPVKVEDKEKDRDRERDDVVRDRERENRERDRPDRNGAFGNKEIGGQKI
SIFSGKDKYLAKPINELDLSNCERCTPSYRLLPKNYPIPSASQRTELGSEVLNDHWVSVT
SGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTES
PIRVEEYFTALNLRCVERLYGDHGLDVMDVLRKNAPLALPVILTRLKQKQEEWARCRSDF
NKVWADIYAKNYHKSLDHRSFYFKQQDSKSLSTKALLAEIKEMSEKKRKEDDVLLAIAAG
NRRPIIPNLEFEYPDPDIHEDLYQLIKYSCGEVCTTEQLDKVMKIWTTFLEPVLGVPPRP
QVAEDTEDVVKAKTHAGKNGAVSGGESDDNPDGGATVTNSKQLNSSRNGDESIQPEQSSS
ARAWTVNGANGLKEESSHDIDRATCKGDTFCNTSQQGKVQSNASTADEMSGVSKQDNFNE
RLVNSNVSLATGLEQSNGRTNVENSSGLSPTPSRPGNGTVEGGLELPSRSSPEGGDSTRP
VISSNGAITEATKGHRYVEESVRHFKIEREEGEISPNGDFEEDNFANYREAGSEAVQKPK
DGVSSRQLKGRHGEEEICGGDAGGENEADADDEGEESAHRSSEDSENASENGDVSGSESG
EGEECSREEREEDGDHDEHDTKAESEGEAEGTADAHDVEGDGTSLPHSERFLLSVKPLAK
HVLPALHDKDKDSRIFYGNDSFYVLFRLHQTLYERIQSAKINSSSAEKKWRASNDTSTSD
SYARFMNALYNLLDGSSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQTVASDEMD
NKLVQLYAFEKSRKPGRFVDVVYHENARVLLHDENIYRIECFSLPTRVSIQLMDYGNDKP
EMTAVSMDPNFSAYLHNDFLTVLPDKREKSGIFLKRNKRKYASCDDLSAICQAMEGLKVA
NGLECKIACHSSKVSYVLDTEDFLFRTKRRRKTSNSSCHNEARSSSGSSRVERFHRLLSG
S
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtctcgtgacgacggttatacaagttcgcaagttaaacggcccatggttacc
tctcgaggcgagccctcggggcagccgcagatgatgacagcaacagcttcccagaaacta
acaaccaatgatgccttatcatatctaaaggcggtgaaggagatatttgaaaacaacaag
gaaaaatacgaagactttcttgaagttatgaaagactttaaagctcagagagttgacacc
tcgggtgtgatacagagggtaaaggatttatttaaagggcatcgagacctaatattaggc
ttcaataccttcttgccgaagggatatgaaatcactctccctctcgatgacgaacaacct
cctcaaaagaagcccgttgaatttgaagaagctatcagttttgtcaacaaaattaagact
cgatttcaacatgatgatcatgtttataaatcctttttggacattttgaatatgtacaga
aaggaaaacaagtccatctctgaagtttaccaggaggtctcagcactttttcaagaccac
ccagacttacttgtggagtttactcactttttacctgatacttcagcaacagcctccacc
cagtttgctccatctcaaagaaactcaatgcttcgtgataggagctctgccatgccccct
atgaggcaaatgcatgttgataagaaagaaaggcctatgggttcttaccctgagcatgat
ctcagtgttgaccgtcctgatctggaccatgatagagctctgatgaaagctgagaaagag
caaaggaggcgtggtgaaaaagaaaaggagaggagagaagacagagaaagacgagatgat
agggattttgaccatgatggcagtagggacttcaacatgcagcgttttccccacaaacgg
aaatccactcgtaggggtgaagacttggctactgatcaattgcatcaaggtggggaagac
gatgaaaaccttggagcacatctcatttcatcttcttatgatgataaaaattctgcaaaa
agtatatatggctcggagagtgccttctgtgagaaggtgaaggagaagttacgaaatcct
gatgattaccaggagtttttgaagtgcctccatatttatagcaaggaaattattacccgg
gctgaattgcagtcattggtgggtgatttacttggaaaatatccagatcttatggatggg
ttcaatgaatttttgtcatgttgtgagaagaaagatgggttccttgctggtgtcatgagt
aaaaaatctttgtggaatgaaggcaatctaccaagaccagtgaaggtagaggataaggag
aaagatcgagatcgtgaaagggatgatgtggttagagatagagagcgtgaaaaccgagaa
agggatagacctgatagaaatggtgcctttggaaataaagaaattggaggccagaagatc
tctatattttccggcaaggacaaatatttggcaaaacctattaatgagcttgacctctct
aattgtgagcgttgcactccgagctatcgtcttctgccaaagaattatccaataccttct
gctagccaaagaaccgaacttgggtctgaagtactaaatgatcattgggtgtctgttact
tctggaagcgaggattattcttttaaacacatgcgcaaaaaccagtatgaagaaagcctg
tttcggtgtgaagatgataggtttgaattagatatgctgttagagtctgtgaatgtaaca
accaagcgtgtggaagaactattagagaagatcaacaacaataccattaagaccgagagt
ccaatccgtgtagaagaatacttcacagctctgaatctaaggtgtgttgagcgattatat
ggtgaccacgggcttgatgtaatggatgtgttgaggaaaaatgctccactagctttgcct
gttatattaacgcgcttgaagcaaaagcaagaagagtgggcaaggtgtcgctctgatttt
aacaaagtctgggctgatatatatgccaagaactaccacaagtcgcttgatcatcgtagc
ttctacttcaagcaacaggactcaaagagcttaagcaccaaagccttgttggcagagatt
aaagagatgagtgagaagaagcggaaggaagatgatgttcttcttgctattgctgctgga
aatagacgtcctattattccaaatttggaattcgagtaccctgatccggacatccatgaa
gatctgtatcaactcattaaatattcttgtggagaagtttgcacaaccgagcaattggac
aaagttatgaagatatggacaaccttccttgagccagtgcttggtgttcctcctcggcct
caggttgcagaggatactgaagatgttgtgaaggcaaaaactcatgctggcaaaaatggt
gctgtgagtgggggagagagtgatgataatcctgatggtggggctactgtgacaaattct
aaacagttaaattcatcgagaaatggagacgaaagcattcaacctgaacaatcaagctct
gcaagagcttggacagtaaatggagctaatgggctcaaagaagaaagttctcatgatatt
gatcgtgctacatgtaaaggtgatactttctgcaatacctctcaacaaggtaaagtgcaa
agtaatgcatctacagccgatgaaatgtctggagtgagcaaacaagacaattttaatgaa
cgattagtcaattctaatgtatcacttgctactggcttggagcaaagcaatggaagaact
aatgtggaaaactcatcaggtcttagtcctactccttccagacctggaaatggcactgtt
gagggtgggcttgagttaccttcacggtcttcaccagagggtggtgattctactagacca
gttatatcctcaaatggagcaatcacagaagccacgaaaggtcacagatatgtggaagag
tcggttagacacttcaagattgaaagagaagaaggtgaaatatctccaaatggagatttt
gaggaggataattttgcaaactatagagaagccggttcagaggctgttcaaaaaccaaag
gatggtgtttccagcaggcaacttaaaggcaggcatggggaagaagaaatatgtggtgga
gatgcaggtggagaaaatgaggctgatgctgatgatgaaggtgaggaaagtgctcataga
tcatcagaggatagtgagaatgcttctgagaatggcgatgtctctggaagtgaatctggt
gagggagaggaatgttctcgagaagagcgtgaggaagatggggaccatgatgagcatgat
actaaggccgagagtgaaggtgaagctgaagggacggccgacgcccatgatgttgaagga
gatggaacttctttaccgcactcagaacgttttctactttctgtgaagcctcttgcaaaa
catgttcttccagctttacatgacaaggacaaggactcaaggattttctatggaaacgat
tctttctatgtactttttaggcttcaccaaacactatatgagagaatacaatcagcaaag
attaactcgtcatcagcggagaagaagtggcgggcatcaaatgatacaagcacttctgat
tcgtatgctagattcatgaatgccctttacaatttacttgacggttcttctgacaataca
aaatttgaggatgattgtcgagctatcatagggactcagtcatatcttcttttcacatta
gacaagctgatctacaagcttgttaaacagctccaaacagtcgccagtgacgagatggat
aataaacttgtccaactatatgcatttgaaaaatcaagaaaaccaggaagatttgtggat
gtagtttatcacgaaaatgctcgtgttcttcttcacgatgagaacatttatcgcatagaa
tgtttctctttgccaacccgggtgtctattcagcttatggattatgggaatgataagcct
gaaatgactgctgtttcaatggaccctaatttttctgcttatttgcacaatgattttctc
actgttcttcctgacaaaagagagaagtctgggatcttcttgaagaggaacaaacgcaaa
tatgcgagttgtgatgatttgtctgctatttgtcaggccatggaaggacttaaagtcgcc
aatggtctggagtgtaagatagcgtgtcattcatccaaggtatcatatgttttagataca
gaagactttttgtttcggacaaaaaggagaagaaaaacttcgaacagttcctgccataac
gaggctaggtcttctagtggttcaagtagagtagagcggtttcaccggttgctctctggt
tcatga
DBGET
integrated database retrieval system
