Rosa chinensis (China rose): 112197812
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Entry
112197812 CDS
T06020
Name
(RefSeq) probable acyl-activating enzyme 16, chloroplastic isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00061
Fatty acid biosynthesis
rcn00071
Fatty acid degradation
rcn01100
Metabolic pathways
rcn01212
Fatty acid metabolism
rcn04146
Peroxisome
Module
rcn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112197812
00071 Fatty acid degradation
112197812
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112197812
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rcn01004
]
112197812
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112197812
Enzymes [BR:
rcn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112197812
Lipid biosynthesis proteins [BR:
rcn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112197812
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of breast milk
112197812
Exosomal proteins of breast cancer cells
112197812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
112197812
NCBI-ProteinID:
XP_024194454
LinkDB
All DBs
Position
4:37478893..37493340
Genome browser
AA seq
722 aa
AA seq
DB search
MATAFLTSSFILGSSSDSGHALPFLCSNKKLRSRHRARYRNPTGFHAFCQSKTEEKQIRR
YSPFLEGASVDGTASLVPDDWQAVPDIWRSSSEKYGDLVALTDPYHDPPSSLTYKQLEKE
ILDFSEGLRIVGVQPEEKIALFADNSCRWLVADQGIMATGAINVVRGSRSSVEELLQIYH
HSDSVAIAVDSPELFNRISEEFCSKAVMKFVVLLWGEKSSLVSDGKIPIFNYKEILDLGR
KSCKSMADSDDGRKYSMYEAINSDDIATVVYTSGTSGNPKGVMLTHRNLLHQIKNLGDIV
PAVGGDKFLSMLPPWHCYERASEYFAFTRGIEQFYTTVRKLKADLRQYQPDFVISVPLVY
ETLYSGIHKQISSSSTVLKLITLAFIRISLAYMEFKRIYEGTYLTRKQKQSSHLVSIADW
LWARVVAAVLWPLHVMGQNLIYSKIQSVIGISKAGISGGGNLPSHVDKFFEAIGIKLLNG
YGLTETSPVVAARHPSCNVLGSVGHPIRHTEFKVVDSETGEVLQPGLSGIVKVRGPQVMK
GYYKNPGATEQVLDEDGWLNTGDIGWIAPHHSIGRSRRCGGVVVLEGRAKDTIVLSTGEN
VEPVELEEAASRSSLIQQIVVIGQDQRRLGAIIVPNKEEALLAAKNLSLVDIDASDLSKE
TMKSLLSQDLQKWTSSCSFQIGRILIVDEPFTIDNGLMTLTMKIRRDRVVARYKEQINNL
FK
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggccacagctttcttaacgtcctccttcattttgggcagttcctctgattctgggcac
gcccttccattcctctgttctaacaagaaattgagaagcagacacagagcacgctaccga
aacccaactgggtttcatgcgttttgccaatcaaagacagaggaaaagcagatacggagg
tattcacctttcctagaaggtgcttctgtggatggtactgcaagtttggtgcctgatgat
tggcaagcagttcctgatatctggagatcttcatctgagaaatatggtgatctcgtagca
ttgacagatccataccatgacccaccttctagtttaacttataaacagcttgagaaggaa
attttagatttttctgaaggtctaagaatcgttggggtacagcctgaagaaaaaattgca
ctttttgcagataactcatgtcgttggcttgtagcagatcaaggtataatggccaccgga
gcaatcaatgtggtaagaggttcaaggtcatcagtcgaagagttactacaaatatatcac
cactcagatagtgttgcaattgctgtcgacagtcctgaactgttcaatcggatttcagaa
gaattctgttccaaggctgtcatgaaatttgttgttcttctttggggggagaaatctagc
ttggtcagtgatgggaagattcccattttcaactacaaagagattctagatttgggacga
aagagttgtaagagtatggccgattctgatgatggacgaaagtactctatgtatgaagca
atcaactcagatgatattgctacagttgtatatacaagcggaacaagtggtaacccaaaa
ggtgtcatgctcactcatcgaaatctgttgcatcagattaagaacctcggggatattgta
cctgctgtaggcggggacaaatttctcagcatgcttccaccttggcattgctatgaacga
gcttctgaatattttgcttttacacgtggaattgaacaattttacacaactgtcaggaaa
ttgaaggctgatttgcgacaatatcaaccagattttgttatttccgttcctttagtgtat
gagacactttacagtgggattcataaacagatttcttccagctctacagttcttaagctt
attacacttgcattcatacggatcagtttggcatacatggagtttaagaggatctatgag
ggaacatatttgacaaggaaacagaagcaatcttcacatcttgtttcaatagcagattgg
ttatgggcaagagttgttgctgcagtattatggcctttgcatgttatgggacagaatcta
atatatagtaaaatccaatctgttatcggaatatcaaaggctggcattagtggaggaggc
aatctaccttcacatgttgataagttttttgaggcaattggcattaaattgctgaacgga
tatggtttaacagagacttctcccgttgttgctgctcgacacccaagctgtaatgttctt
ggttcagttgggcatccgattcgacatactgagttcaaagttgtagattctgaaactggt
gaagttctccaacctggtttaagtggcattgtaaaagttaggggcccacaagtgatgaaa
ggatactacaagaatccaggggctacagaacaagtattagatgaggatggttggctaaac
actggagatataggttggattgctcctcatcattcaatagggcgaagtcgtcgttgtgga
ggtgttgttgtccttgaaggacgtgcaaaggacaccatagtgctttcaacaggagaaaac
gttgaaccagtagagcttgaggaagctgcctcaagaagtagtctaattcaacaaattgtt
gtcattggccaggatcaacgacggcttggggcaataattgttccaaacaaagaagaggct
ttacttgcagctaagaatttgtcccttgtagatattgatgcctctgacctaagcaaggag
acaatgaaaagcttgttgtctcaagatttacaaaaatggacttcaagttgttcatttcaa
attggacggatcttaattgtagatgaaccctttacgattgataatggtttgatgactctg
acaatgaaaattcgaagggatagagtcgtggctcgatacaaggaacagataaacaatctg
ttcaagtga
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