Rosa chinensis (China rose): 112197991
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Entry
112197991 CDS
T06020
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112197991
Enzymes [BR:
rcn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112197991
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112197991
NCBI-ProteinID:
XP_024194742
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Position
4:complement(13103501..13108078)
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AA seq
453 aa
AA seq
DB search
MAVSESKKWILACVSVLLLFCFVAVMSGRVSLDGTSLIRNGGTEELLKSSSNSSMAARVN
ENDDDEGLNKHAVENPEEIASMVDMSIRNSTERRKLGYFSCGTGNPIDDCWRCDPNWQKN
RKRLADCGIGFGRNAIGGRDGRFYVVTDPKDDDPVNPRPGTLRHAVIQDEPLWIVFKRDM
VIQLKQELLMNSFKTIDGRGVNVHIANGACITIQFVTNIIVHGLHIHDCKPTGNAMVRSS
PSHFGWRTMADGDAVSIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNHFTHHNEV
MLLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAE
PTINSQGNRYAAPTNPFAKEVTKRVETAQTQWRGWNWRSEGDLLLNGAFFTPSGAGASAV
YARASSLGAKSSAMVGTITAGAGVLGCRRGHTC
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttccgagagtaagaaatggattctggcttgcgtgtcggtgcttctcttgttc
tgcttcgtcgctgtaatgtccggtagagttagcctcgacggcacctctctcatcaggaat
ggagggactgaggagttgttgaagagctcgagcaattcatcaatggcggccagggtgaat
gagaatgatgatgatgaaggcttgaataagcatgcagtagagaaccctgaggaaattgct
tcaatggttgacatgagtatccgcaacagcactgaaaggagaaagctgggctacttctca
tgtggaactggaaatcccattgatgattgctggcgttgtgatcccaactggcaaaagaac
cgcaagcgtcttgcagactgtggcattggtttcggcagaaatgccattggtggtcgtgat
ggacgcttctatgttgtcactgaccctaaagatgatgatcccgttaaccccagacccggt
actctgcgccatgctgtcatccaggatgagcctctctggattgtgttcaaacgtgacatg
gtgatccaattgaagcaggagcttctcatgaatagcttcaagaccattgatggccgtgga
gtcaatgtccacattgctaacggagcatgcattacaatccagtttgttacaaacattata
gttcatggtctgcatatccatgactgcaagcctacaggaaatgctatggtgaggagctcc
ccatctcactttgggtggaggactatggctgatggtgatgctgtctccatcttcgggtca
agccatatctgggttgatcacaattccctctccaattgtgctgatggtcttgttgatgct
gtcatggggtcaactgctattaccatctcaaacaaccactttacccaccacaatgaagtt
atgctgttgggccacagtgattcttataccagggacaagcaaatgcaggtgactattgcc
tacaaccactttggagagggacttatccaacgaatgccaaggtgtagacacggatatttc
catgtggtgaacaacgactacactcactgggagatgtatgccattggtggaagtgcagaa
cctaccatcaacagccaaggcaacagatacgcagctccaaccaacccctttgcaaaggag
gttaccaagagagtggagacagcacaaactcagtggaggggctggaactggaggtcagaa
ggtgatcttctactcaatggtgccttcttcactccatctggagctggagcttcagctgtc
tatgccagggcctcaagcttgggagccaagtcatctgccatggtgggaaccataactgct
ggtgctggtgtactgggttgccgcagaggacatacctgctag
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