Rosa chinensis (China rose): 112198006
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Entry
112198006 CDS
T06020
Name
(RefSeq) autophagy-related protein 3
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112198006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112198006
04121 Ubiquitin system [BR:
rcn04121
]
112198006
03029 Mitochondrial biogenesis [BR:
rcn03029
]
112198006
Membrane trafficking [BR:
rcn04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
112198006
Ubiquitin system [BR:
rcn04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
112198006
Mitochondrial biogenesis [BR:
rcn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112198006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
112198006
NCBI-ProteinID:
XP_024194766
LinkDB
All DBs
Position
1:complement(38445961..38450996)
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AA seq
307 aa
AA seq
DB search
MVLSQRLHEAFKGTVEKITGPRTVSAFKEKGVLSVSEFVTAGDNLVSKCPTWSWESGEPS
KRKPYLPSEKQYLITRNVPCLRRAACVEEEYEAAGSEVLIDNEDNDGWLATHGKPKDKSS
EEENFPSIESLEISKVRSAPSQVGGEGEDEDDIPDMADYEEADNIEIDPGTYLVAHEPDD
DNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQAELVLEDVSQDHARKTVTIEDHP
HLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPTIEYDYTMDF
DLGSSSS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggttctgtcacagaggcttcacgaggcgttcaaaggcaccgtcgagaaaatcacaggg
cctcgcaccgtctccgctttcaaagagaaaggcgtcctcagcgtctccgagttcgtcacc
gccggcgataacctcgtctccaagtgccctacctggtcttgggaatccggagagccaagc
aagaggaagccatacctaccatctgaaaagcagtatttgattactagaaatgtcccttgt
ttacgcagggctgcttgtgtggaagaggagtacgaagctgcaggttcggaagttcttatc
gataatgaagataatgatggctggttggcaacacacgggaagccaaaggataaaagtagt
gaggaggaaaactttccttctattgaaagtttagaaatcagcaaggtgaggtcggccccc
tcgcaagttgggggtgaaggtgaagatgaagatgatatccctgacatggctgattatgaa
gaagctgacaacattgaaatagatcctggaacatatcttgttgctcatgaacctgatgat
gacaatattttacggacccggacatatgatgtcagcattacgtatgataaatattaccaa
actcctcgggtgtggcttactggctatgatgagtcaagaatgcttttacaagcagagctt
gtacttgaagatgtcagtcaagatcatgcacgcaaaactgtaactattgaggatcatccg
cacttgcccggaaagcatgcatctgtccatccatgccgacatggggctgtgatgaagaaa
ataattgatgtactaatgtcacgtggagtggaaccggaagtcgataagtacctcttctta
ttcttgaaatttgttgcctcggtgattccaaccatcgaatatgactatacgatggacttt
gatcttggcagctccagcagttga
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integrated database retrieval system
