Rosa chinensis (China rose): 112198018
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Entry
112198018 CDS
T06020
Name
(RefSeq) chaperonin CPN60-2, mitochondrial isoform X4
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112198018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112198018
03110 Chaperones and folding catalysts [BR:
rcn03110
]
112198018
03029 Mitochondrial biogenesis [BR:
rcn03029
]
112198018
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112198018
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
112198018
Messenger RNA biogenesis [BR:
rcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
112198018
Chaperones and folding catalysts [BR:
rcn03110
]
Heat shock proteins
HSP60 / Chaperonin
112198018
Mitochondrial biogenesis [BR:
rcn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
112198018
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112198018
Exosomal proteins of other body fluids (saliva and urine)
112198018
Exosomal proteins of breast cancer cells
112198018
Exosomal proteins of colorectal cancer cells
112198018
Exosomal proteins of bladder cancer cells
112198018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CO_dh
Motif
Other DBs
NCBI-GeneID:
112198018
NCBI-ProteinID:
XP_024194792
LinkDB
All DBs
Position
4:12708566..12713234
Genome browser
AA seq
573 aa
AA seq
DB search
MYRLASKARVARNSAQQIGGRLSWSRNYAAKDIKFGVEARALMLNGVEDLADAVKVTMGP
KGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGTTCAT
ILTRAIYTEGCKSVAAGMNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGTISAN
GEREIGELIAKAMEKVGKEGVITIADGKTLYNELEVVEGMKLDRGYISPHFITNTKNQKC
ELEDPLVLIHEKKVSNINAVIKVLELALKRQKPLLIVAEDVESDALATLILNKLRAGIKV
CAIKAPGFGENRKSNLQDLAVLTGGTVITEELGLNLEKVDLDMLGTCKKVTISKDDTVIL
DGAGDKKEIEERCEQIRSAIEASTSDYDREKLQERLAKLSGGVAVLKIGGASEAEVSEKK
DRVTDALNATKAAVEEGIVAGGGVAVLYAAKELDKLPTANFDQKIGVQIIQNALKAPVHT
IASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALTDAASISS
LLTTTEAVVVELPSEKETPAMGGGMGGMGGMDY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcctcgcttccaaagctcgggttgctaggaacagtgcccagcagattggtggt
aggttgagttggagcagaaactatgcagcaaaagacattaaatttggcgtggaggcccga
gccctcatgctcaatggtgtcgaagacctcgccgatgctgttaaagtcacaatgggccct
aagggtcgtaatgtggttattgagcaaagctttggcgcacccaaagtaacaaaagacggt
gtaacagttgcaaaaagtatcgagtttaaggataaagttaagaatgttggagctagcctt
gtaaaacaggttgctaatgccacaaatgatgtagcgggtgatggtactacttgtgctaca
atcctgacaagagctatctacactgaaggatgcaagtcagttgctgctggtatgaacgcc
atggacctaagacgtggtattaacatggcagttgattctgtagtaactaacttgaagagc
agagcccgaatgattagcacttctgaagagatagcacaggttggaacaatatcggcaaat
ggcgagagagaaatcggtgaattgattgcaaaggccatggagaaggttggcaaggaagga
gtaatcacgatcgctgatggaaaaacattgtataacgagttggaagttgttgagggcatg
aagctagacagaggctacatatctcctcatttcatcaccaacacaaaaaatcaaaaatgt
gaattggaagatcctttagttctaatccatgagaagaaagtctcaaatattaatgctgtg
attaaagtattggagttggctttgaagaggcaaaagcctttgctgattgtcgcagaagat
gtggaaagtgatgcacttgcaacacttatattaaataagcttcgtgctggaatcaaggtt
tgtgctatcaaagcccctggtttcggggaaaataggaaatccaatctgcaggatcttgca
gttctcacaggtggcactgttattactgaagagctgggtttgaaccttgagaaagtggat
ctggatatgcttggaacttgcaaaaaggtcacaatttcaaaagatgacactgtaattctt
gacggtgctggtgacaagaaggaaattgaggaaagatgtgaacagattcggtcagcaatt
gaagcaagcacttctgattatgacagagagaagttacaagagagactggcaaaactttct
ggtggtgttgctgtgttgaagattggaggagctagtgaagctgaagttagtgagaagaag
gatagggttactgacgccctgaatgccacaaaggcagccgttgaagagggtatagtagca
ggtggtggtgttgcagtcctttatgcagctaaagagttggacaaacttccaactgctaac
tttgatcagaagattggagttcagattattcagaatgctctgaaggcacctgtccacaca
attgcttctaatgcgggggtcgaaggagctgttgttgttggtaagctcttggagcaagat
aaccctgatctgggatatgatgcagctaaaggtgaatatgttgatatggtcaaagctgga
ataatagacccattgaaagtaattaggaccgctttaacggatgctgcaagtatttcatct
ttgctgacaactactgaagccgtcgtagttgaacttcctagtgagaaggagaccccggca
atgggcggtggcatgggtggcatgggtggcatggattattga
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