Rosa chinensis (China rose): 112198069
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Entry
112198069 CDS
T06020
Name
(RefSeq) LOW QUALITY PROTEIN: AP-4 complex subunit epsilon-like
KO
K12400
AP-4 complex subunit epsilon-1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112198069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112198069
Membrane trafficking [BR:
rcn04131
]
Endosome - Golgi transport
Others
AP-4 complex
112198069
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT
INTS1_R4
HEAT_2
TOR1L1_N
PDS5
NPHI_C
HEAT_EF3_N
Cnd3
Motif
Other DBs
NCBI-GeneID:
112198069
NCBI-ProteinID:
XP_024194855
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All DBs
Position
4:29313841..29323404
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AA seq
572 aa
AA seq
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MEQLKTIGRELAXSQGGFGQSKEFLDLVKSIGEARSKAEEERIVLHEIETLKRRLSEPDI
PKRKMKEYIIRLVYVEMLGHDASFAYIHAVKMTHDDNLVLKRTGYLAVSLFLNDDHDPII
LIVNTIQKDLKSDNYLVVCTALNAVCKLINDETVPAVLPQVVELLGHQKEAVRKKAIMVL
HRFYQKSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLFDLITIDVNTYKDLVVSFVSILK
QVAERRLPKTYDYHQLPAPFIQIRLLKILALLGSGDKQSSEKMYMVVGDIFKKCDSTSNI
GNAVLYECICCVSAIHPNPKLLEQAAQVISRFLKSDSHNLKYMGIDALGRLIKISPEIAE
QHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIDYMISLNDNHYKTYIASR
CVELAEQFAPSNQWFIQTMNKVFEHAGDLVNVKVAHNLMKLIAEGFGEDDDTADSQLRSS
AVESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKYSASYITGKLCDVAEAYSNDETVKV
LCTGDGTVVDGAGCAEQVRFVCCSPVHYAMVL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctcaagaccatcggccgggagctcgcgnnctcccaaggcggcttcggccaa
tccaaggagttcctcgacctcgtcaagtccatcggcgaagctcgatccaaggccgaagag
gagcgcatcgtcctccacgagatcgaaaccctaaaacgacgcctctccgagcctgacatc
cccaagcgcaagatgaaggagtacatcatccgcctcgtctacgtcgaaatgctcggccac
gacgcgtcgttcgcttacatccacgccgtgaagatgacgcacgacgacaatctcgtcctc
aagcgcaccggctacctcgccgtctcgctcttcctcaacgacgatcacgaccccatcatt
ctcatcgtcaacaccatccagaaggacctgaagtctgacaattacctcgtcgtgtgcact
gccctcaatgccgtctgcaagctcatcaacgacgagaccgtgcccgccgttttgccccag
gtcgtggagctcctagggcaccagaaggaggcggtgaggaagaaggcgatcatggttctt
catcggttttatcagaagtcgccatcgtcggtttcgcatctggtgtccaatttccggaag
cggctctgtgataacgatcctggagtcatgggagccacgctgtgcccgttgttcgatctc
attaccatcgatgtgaatacgtataaggatttggtggttagctttgtgagcattctgaag
caagttgcagagcgtaggttgcccaagacctatgactaccatcagcttccagcgcccttt
attcagattaggttgttgaagattttggcattgttggggagcggggataagcaatcgagt
gagaagatgtatatggtagttggcgacatatttaagaagtgcgattccacgagtaatata
ggaaatgcagttctttatgagtgtatttgttgcgtttctgcaatacatcctaatccaaaa
ttgttagaacaggctgctcaagtcatctcaagatttttgaagagtgacagtcataatttg
aaatatatgggcattgatgctcttggtcgactgataaagatcagtccggagatagctgag
caacaccagttggctgtcattgattgcttagaggacccggatgacactttgaagcgaaaa
acatttgaactgttatacaagatgacaaagtcctccaatgtggaggtgattgttgaccgt
atgattgattacatgataagccttaatgataaccattacaaaacatatatagcatctcga
tgtgtggagcttgctgagcaatttgctccgagcaatcaatggtttatccagaccatgaat
aaagtcttcgaacatgcgggagatttggtgaatgttaaggtggcacataacttgatgaaa
ttgatcgccgagggatttggagaggatgatgatactgcagatagtcagttgagatcatct
gcggtggagtcatatttgcgcatcattggagagccaaagcttccgtctgtatttcttcag
gtcatttgttgggttttgggggaatatggaactgctgatggaaagtattctgcttcgtat
atcactgggaagttatgtgatgtggcagaggcatattcaaatgatgaaactgtcaaggta
ctgtgcactggtgacgggacagtagtggacggagctgggtgtgcggaacaagttcggttt
gtttgttgcagcccggtgcattatgcaatggtgttgtaa
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