Rosa chinensis (China rose): 112198235
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Entry
112198235 CDS
T06020
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112198235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112198235
03041 Spliceosome [BR:
rcn03041
]
112198235
03032 DNA replication proteins [BR:
rcn03032
]
112198235
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
112198235
Spliceosome [BR:
rcn03041
]
Complex A
U1 snRNP components
Sm proteins
112198235
U2 snRNP components
112198235
Complex B
U1 snRNP components
112198235
U4/U6.U5 tri-snRNP components
112198235
Complex C
U2 snRNP components
112198235
DNA replication proteins [BR:
rcn03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
112198235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
112198235
NCBI-ProteinID:
XP_024195087
LinkDB
All DBs
Position
4:complement(23416597..23418983)
Genome browser
AA seq
88 aa
AA seq
DB search
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDVRIEGRIIGFDEYMNLVLDDAEEV
SIKKNTRKTLGRILLKGDNITLMMNTGK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaccaaagtccagcggattatgacacagcctattaacttgattttcaggttc
ctccaaagtaaagctcggattcagatttggctctttgagcagaaagacgtcaggattgaa
ggccgcattattggatttgatgagtacatgaatctggttctggatgatgcagaagaagtc
agcatcaagaaaaacaccaggaagacattaggaaggattcttcttaaaggtgacaacatt
actctgatgatgaacacggggaaatga
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