Rosa chinensis (China rose): 112198420
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Entry
112198420 CDS
T06020
Name
(RefSeq) ABC transporter B family member 11 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112198420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112198420
04147 Exosome [BR:
rcn04147
]
112198420
04090 CD molecules [BR:
rcn04090
]
112198420
Enzymes [BR:
rcn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112198420
Transporters [BR:
rcn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112198420
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112198420
CD molecules [BR:
rcn04090
]
Proteins
112198420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
ABC_ATPase
AAA_16
Zeta_toxin
RsgA_GTPase
DUF5906
AAA_21
AAA_15
AAA_30
DUF87
DUF815
YobI-ATPase
Motif
Other DBs
NCBI-GeneID:
112198420
NCBI-ProteinID:
XP_040374774
LinkDB
All DBs
Position
4:52991678..52998204
Genome browser
AA seq
1296 aa
AA seq
DB search
MAEENPLDGDAITKQENATNSHPAVTEGSNENRQDTNQSKEDGTKTVPLYKLFSFADSMD
YLLMSVGTISAIGNGLCMPLLTIIFGDLITSFRETGNNKRVADAVSKVALKYVYLALGGA
AAAFLRKSIGSVFLINCLAWCKSEILDFCVLEMSCWMVTGERQAARLRSLYLKTILRQDV
SYFDQEINSGEIVGRMSGDTLLIKEAMGEKAGTFFQVVATFIGSYFIAFFKGWLLTLVML
SSIPPLVLSGAVMNHFIVKLASHGQAAYSGGAIVVEETIGSIRTVASFTGEKQAISNYNN
SLNKAYKSGVQEGWASGLGSGVLMLLVFCTYALAVWFGGIMILEKGYKGEDAMIVLFAVV
IGSLSLGKVSPCITAFAPGQAAAYKMFETINRKPKIDAYDTNGRVLQGILGDIELRDVCF
SYPTRLDEQIFNGFCLSIPSGATAALVGESGSGKSTVLSLIERFYDPQDGEVLIDCVNIK
EFQLKWIRQKIGLVCQEPVLFTGSIKDNIAFGKDGATTEEVATAAELANAAKFIALLPQG
IDTLVGEHGTQLSGGQKQRVAIARVILKNPRILLLDEATSALDTESERVVQEALDRIMVD
RTTIIVAHRLSTVRNADTIAVIHHGTIAEKGPHSELSKDPDGAYSRLIRLQETSSVSEHS
EHTCLSSEKSSPRSGSRHSFSISNGNPTASGILETTTVEPDVPASVPSEGPPGVSLRRLA
YLNKPEIPVLLLGTIVAAVNGVIFPVYGSLLSSVIKTFFEPPHELRKHSKFWATIFVVLG
VVSFLAQSSRAYLFAVAGCRLIRRVRAMCFEKVVYMEVSWFDEAEHSSGAIGARLSTDAA
SLRGLVGDALGLLIQNTATAITGMIIAFSANWQLSLVILVLLPLLGVNGYFQVQYMKGFS
ANAKKMYEDASQVASDAVGSIRTIASFCAEEKVIELYKKKCDGPIKTGIRQGIVTGIGFG
VSLFLQFSVFALIFYTGGLLVAAGKTTFFAVFQAFFALTIASLGLAQSSSLAPDVSKGKS
SAASIFAILDRKSKIDSSDNSGMTIENVMGEIEFQHVNFKYPSRPKVPIFNDLCLTISCG
KTIALVGESGSGKSTVISLIQRFYDPNAGHITLDGIEIQKLQLRWLRKQMGLVSQEPPLF
NDTIRANIAYGKGGEATEAEVIAAAELANAQEFISSLQHGYDTIVGERGVQLSGGQKQRV
AIARAILKAPKILLLDEATSALDAESERVVQDALDRVMVDPTTVVVAHRFSTIKGADVIA
VVKNGVIAEKGKHESLIRISNGIYASLVALHASASS
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagaatcccttggatggagatgcaataaccaaacaagaaaatgcaacaaat
agccatccagcagtgacggagggttccaacgaaaacagacaagatacaaaccagagcaag
gaggatggaactaaaacagttccgctttacaaacttttctcttttgccgattccatggat
tacctgttaatgtctgttggtacaatcagcgctattggtaatggactctgtatgcctcta
ctgaccataatctttggagatctaattacttcttttagagaaactgggaataacaagaga
gtggctgatgcagtttccaaggtggctctaaagtatgtttacttggctcttgggggtgct
gctgcagcatttctacgtaagtccattgggtcagtttttttaataaattgtttggcctgg
tgcaaaagtgaaatacttgatttctgtgtgctagagatgtcatgctggatggtcactgga
gagagacaggctgcacgattacgaagtttatacttgaagaccatactgaggcaagatgtc
agctattttgatcaagaaatcaactctggagaaattgttgggaggatgtcaggtgatact
ctgctcattaaagaggcgatgggtgagaaggcaggaacttttttccaagtagttgcaaca
ttcataggcagctactttatagcattttttaagggatggcttctcacccttgtcatgcta
tcctctattccccctcttgtcttatctggtgctgtcatgaaccatttcatagtgaaattg
gcgtcccatggacaagctgcatattcaggaggagcaattgtggtagaggagacaattggt
tctatcagaactgttgcatcgttcacaggggagaagcaagctatatctaactacaataac
tccttgaataaagcttacaagtccggtgtgcaagagggttgggcatctggtttgggttct
ggtgtacttatgcttttggtattctgtacttatgctttggccgtatggtttggtggaata
atgatacttgaaaaaggatacaagggagaagatgccatgatagtactttttgctgtggta
attggctcactatctcttgggaaagtgtctccttgcatcactgcatttgctcctggacaa
gctgcagcttataagatgtttgagacaattaacagaaagccaaagatagatgcgtatgat
actaatgggagggtattacaaggtattcttggagacatagaactgagggatgtttgtttt
agttatcccacaagactggatgagcaaatattcaatggattttgtctctcaatacctagt
ggtgcaactgctgctttggttggagaaagcggaagtggtaaatcaactgtactcagtttg
attgagagattttatgacccccaggatggtgaagttcttattgattgtgttaatatcaaa
gagttccaactgaaatggatcagacagaaaattggccttgtatgccaggaaccagttttg
tttactggtagcattaaagataatattgcgtttggaaaggatggtgctactactgaagag
gtagcgactgctgctgagcttgccaatgctgcaaaattcatagctttactgcctcaggga
atagatacactggttggtgagcatggaactcaactatctgggggacaaaagcaaagagtt
gctatagctagagtaattctgaagaacccaagaattttacttttagatgaagccacaagc
gctcttgacacagaatctgaaagagttgttcaggaggcactggacagaattatggttgac
cggactactatcattgtagcccatcgcttgagcactgtaaggaatgctgataccattgct
gtcatacatcacggaacaattgctgagaaaggaccacattctgagctaagcaaggatccc
gatggagcatatagcaggcttataaggttgcaagaaactagttctgtgtcagaacactcg
gaacatacttgtctaagttctgagaaatcatctccaagaagtggtagtcgtcactcattc
tcaatctcaaatggtaatcctactgcaagcggtatccttgaaacaacaactgtagaacct
gatgttcctgcttcagtaccatcagaagggcctccaggagtctctcttcgccgccttgct
tacctgaacaagccagagataccagtgctacttctaggtactatagttgcagcagtcaat
ggggtaatcttccctgtttatggtagtttgttgtcaagtgtaatcaagaccttctttgag
ccacctcatgaactccgtaagcattccaagttttgggcaacaatctttgttgttcttgga
gtggtatctttcttagcacaatcatcaagagcgtacctctttgccgtggcgggttgcagg
ttaataagaagagtccgagcaatgtgctttgagaaggtggtttacatggaagtaagttgg
ttcgatgaagctgagcactcaagtggtgccattggagcaaggctttctacagatgcagcg
tctttgagagggcttgttggagatgctcttggtttgttgattcagaatacagcaacagca
attacagggatgattattgcttttagtgcaaattggcaactttctcttgtaatccttgtt
ctgttacccttattaggagtaaatggatattttcaagtgcagtacatgaaaggattcagt
gcaaatgcaaagaaaatgtacgaggatgcaagccaagtagctagtgatgctgtggggagt
attcggacaattgcttccttttgtgctgaagagaaggtgattgagttgtacaagaaaaaa
tgtgacggccctattaagacagggataagacaagggatagttactgggataggtttcggg
gtatcactctttttacagttttcagtgtttgccttgattttttatactggaggtctactt
gttgcagcaggcaagacaacattctttgctgttttccaggctttctttgctctcactatt
gcttctctcggacttgcgcagtcgagctccctagcacctgatgttagtaaaggaaagagc
tctgctgcttccatatttgcaattcttgaccggaaatcaaaaatagactctagtgataac
tcgggcatgacaatagagaatgtgatgggagaaattgaatttcagcatgtcaatttcaag
tatcctagtagacctaaagtgccaattttcaacgatctttgcttgaccattagttgtggc
aagacaattgctctggttggtgaaagtgggagtggaaaatcgacagtgatctctttgatc
cagagattttacgaccccaatgctggtcacattacattggatggaatcgaaatccagaaa
ctacagttgaggtggttaagaaagcaaatggggctggtgagccaggagcctccgctgttt
aatgacaccatccgagccaacattgcatatggaaagggaggagaggcaaccgaggctgaa
gttatagctgcagcagaactggcaaatgcacaagagttcattagtagtttacaacatggt
tatgatacaatagtaggagagcgaggggtccaattgtccggtggacagaagcaaagagtt
gctattgcacgagctattttgaaggcaccaaagatattactacttgatgaagccactagt
gctcttgatgctgaatccgaacgagtggttcaagatgcactggaccgagttatggtggat
ccaaccacagtggttgttgcccatcggttttccacaataaaaggtgctgatgtcattgct
gtggtaaaaaatggagtcattgcagagaaagggaagcatgaaagtttgatcagaatcagc
aatggcatttatgcttctttggtagcattgcatgcaagtgcctcatcttag
DBGET
integrated database retrieval system
