Rosa chinensis (China rose): 112198431
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Entry
112198431 CDS
T06020
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00450
Selenocompound metabolism
rcn00970
Aminoacyl-tRNA biosynthesis
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
112198431
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112198431
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rcn01007
]
112198431
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112198431
Enzymes [BR:
rcn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
112198431
Amino acid related enzymes [BR:
rcn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
112198431
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112198431
Prokaryotic type
Other AARSs
112198431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
112198431
NCBI-ProteinID:
XP_024195324
LinkDB
All DBs
Position
4:38779178..38786297
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AA seq
798 aa
AA seq
DB search
MGDLAVTSKEGPKLPIPGQRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYN
TVYICGTDEYGTATETKALEEKCSPKEICDKYHAIHRQVYEWFNISFDKFGRTSMPEQTE
VCQAIFNRLLENNWLSENTMQQLYCDTCTRFLADRLVEGTCPTQGCDYTSARGDQCENCG
KLLNPTELKDPKCKVCKSTPRIRDTNHLFLELPLLKDRLEEYINKMSVEGSWSQNAIQAT
NAWLREGLKQRCITRDLKWGVPVPHDNFRDKVFYVWFDAPIGYVSITKCYTPDWEKWWKN
PEDVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYEAGKFSKSKGIGV
FGNDARDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVA
KPSGQGYDSIIPDAQDAISDPLTEKIAEKVGKCVEQYVEAMEKVKLKQGLKLAMSISSEG
NAYLQESQFWKLYKEDQPRCSIVMRTAVGLVHLLACLLEPFMPSFSVEVFKQLNLSPETH
ISLCDDKGDTDRARRPWEIVPRGHKIGKPEPLFKELNDDEVDSLRKRFAGSQADRKEREE
AEAVKLAEQLKKSKVSDKSGKKKQQATKSATEAEISISRLDIRVGLITKAQKHPDADALY
VEEIDVGEGQPRTVVSGLVRFIPLEEMQNRKVCVLCNLKPATMRGIKSQAMVLAASNSDH
TTVELVDPPKSAQVGERITFPGFQGEPDDVLNPKKKVWETLQVDLHSNPELVACYKDIPL
TTSAGVCTVKSIRGGSIR
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccttgccgttacttccaaggagggccccaagctccccatccccggccaacgc
aacgtcctcatcaccagcgcattgccgtatgtcaacaacgtccctcatctcggcaacatc
atcggctgtgttctcagcgccgatgtcttcgctcgctactgccgtctccggggatacaac
actgtctatatctgcggcaccgatgagtacggcaccgccaccgagaccaaagccctggag
gagaagtgtagccccaaggagatctgcgataagtatcatgcgattcataggcaggtgtac
gagtggttcaatataagttttgacaaattcgggcgaacttcgatgccggagcagacggag
gtgtgccaagcgattttcaataggctgctggagaataattggctttctgagaacacaatg
cagcagctatattgtgatacttgcacacggtttttagccgacaggcttgtggaggggacg
tgcccaactcaaggttgtgattatacttctgcaagaggagatcagtgtgagaactgtggg
aagcttttaaaccccacagaattaaaggatccgaagtgcaaggtctgtaagtcgactcca
cggattcgtgatacaaaccatttgtttctggaactgcctttgctgaaggataggttggaa
gagtatattaataaaatgtcagtggaggggtcttggagccagaatgccattcaagcaaca
aatgcgtggctcagagaggggcttaaacaacggtgtatcactagggatctgaagtggggg
gttccagttccacatgataacttcagggacaaggttttctatgtgtggtttgatgcgcct
attggatatgtttcaattactaaatgctacactccagattgggagaaatggtggaagaat
ccagaggatgtggagttgtatcagtttatgggcaaagataatgtgccattccacacggtg
atgtttccttccacgcttcttggaactggtgaaaattggaccttaatgaagacaattagt
gttactgaatacttgaactatgaagcaggaaagttttccaagagtaaagggattggagta
tttggaaacgatgccagagatacaaacattcctgttgaagtatggcgatattacttgctg
accaataggcccgaggtgtcagatacattatttacatgggcggatttgcaagcgaagctc
aacagtgaattgctgaataatttgggcaacttcattaaccgagttttgagttttgttgcc
aaaccttcaggtcaaggatatgactccattattccagatgctcaagatgccatctctgat
cctttgacagagaaaatagctgaaaaagtgggtaaatgtgtggagcaatatgtggaggcc
atggagaaggtaaaactaaagcaaggactcaaactagcaatgagcatttcaagtgaaggg
aatgcatatctgcaagaaagtcagttctggaagctttacaaggaagatcaacctcgctgc
tccattgttatgagaactgcagtggggctagtgcatcttcttgcttgcttattagaaccc
ttcatgccatctttttctgttgaggtatttaagcagcttaatttgtctcctgagacgcat
atatcactttgtgatgataaaggcgatactgatagggcaagacggccatgggagattgta
cctagaggtcacaagattgggaaaccagagccgttgttcaaggaattgaatgatgatgaa
gtagattctctaaggaagaggtttgctggaagtcaggcggatagaaaggaaagggaagaa
gctgaagcagtgaagttggctgagcagctcaagaaatcaaaagtttcagacaagagtgga
aagaagaaacaacaagccacaaaatctgcaactgaagcagagatttccatatctagacta
gatattcgtgtcggcctcattacaaaagctcagaagcatcctgatgctgatgcactttat
gtggaagagattgatgtcggcgaaggacagcctagaacagttgttagtggactagtcagg
tttatacctcttgaagaaatgcagaatcggaaggtatgcgtcctttgcaacctgaagcca
gcgaccatgcggggtattaaatcacaagcgatggttcttgctgcttcaaatagtgaccac
accacggttgagttggttgatccaccaaaatctgctcaagttggggagagaattacattt
ccggggttccaaggtgagcctgatgatgtgttgaaccccaagaagaaggtttgggaaacc
ctacaggtagatttgcacagtaaccctgagctagtcgcatgctacaaagatattcccctc
actacatcagcaggtgtttgcactgttaaatctattcgaggtgggtcaattaggtag
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