Rosa chinensis (China rose): 112198547
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Entry
112198547 CDS
T06020
Name
(RefSeq) LOW QUALITY PROTEIN: ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112198547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112198547
03110 Chaperones and folding catalysts [BR:
rcn03110
]
112198547
03029 Mitochondrial biogenesis [BR:
rcn03029
]
112198547
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112198547
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
112198547
Messenger RNA biogenesis [BR:
rcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
112198547
Chaperones and folding catalysts [BR:
rcn03110
]
Heat shock proteins
HSP60 / Chaperonin
112198547
Mitochondrial biogenesis [BR:
rcn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
112198547
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112198547
Exosomal proteins of other body fluids (saliva and urine)
112198547
Exosomal proteins of breast cancer cells
112198547
Exosomal proteins of colorectal cancer cells
112198547
Exosomal proteins of bladder cancer cells
112198547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7621
Motif
Other DBs
NCBI-GeneID:
112198547
NCBI-ProteinID:
XP_024195459
LinkDB
All DBs
Position
4:complement(60049909..60054195)
Genome browser
AA seq
610 aa
AA seq
DB search
MAFSPTPISALSSTNPTLPKRTSSPFTTANPIGIPKDLYFNHDGSATKKLLAGVSMVAEL
VGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDSVENVGVKLLRQAGAKTNDLAG
DGSTTAVILAHGLITEGVKVTAAGMNPIQIARGIEKTAVALVSELKLMSREIEDHELADV
AAVSAGNDYTVGNMIYNALCQVGKKGVITIEKGKSTENTLQIVEGMQFDRGYLSPYFVTD
RQKMIVEFQECKLLLVDEKITHPEELFKILDNAVKEKYPIVIVAEGIEQEALTPVIRNKL
RGALKAVAIKAPAFGERKSHYLDDIAILTGATVVREEMGMILHKTGPEVLGTATKVVITK
DSTLIVTDGSTREAVDKRVSQIQRLVENTKEEFQKKILNERIGRLSGGIAILQVGAQTQV
ELKDKQLRIEDALNATKAAIEEGVVVGGGCCLLRLSKKVDAIKEVLENEEQKIGAEIFKK
ALSYPAKLIAKNAGVNGSVVVEKVLSNADXGYGYNAARDCYEDLMKAGIMDPSKVVRCCL
EHAASVAKTFLLSDAVVVEIKELNPIPRRMPRRRPKPPLPPMPQMPQMPPMPPMSMPTSG
ARSFGSKYGR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcattttctccaactcccatctctgcactttcttccaccaacccaacactgcccaaa
aggacttcttcaccttttaccactgcaaatccaataggcatacccaaagacctctacttt
aaccatgatggttctgccacaaagaagcttctggcaggggtgagcatggtggcagagctg
gttggggttacattgggtccaaagggaaggaatgtggtgctgcagaataagtatggacct
cccaagattgtcaatgatggtgaaactgttctcaaagagatcgagttggaggactctgtg
gagaatgtcggagttaaactgttaaggcaagctggagcaaaaacaaatgacctggccgga
gatggttccactacagctgtaattcttgctcacggtttaattactgaaggtgtgaaggtt
actgcagctggcatgaatcccattcaaattgctcgtgggattgagaagactgcagtggcc
ctagtttctgaactcaaattgatgtccagagagattgaggatcatgaacttgcagatgtt
gctgcagttagtgcaggcaatgattatacagtggggaacatgatttacaatgctctttgt
caagtaggaaagaagggtgtaattactattgaaaaagggaagtctacggaaaacactctt
caaattgtagaaggaatgcagtttgatcgtggatacttatctccttactttgtcactgac
cgacaaaaaatgatagtggagtttcaagagtgtaagttgcttttggttgacgaaaaaatt
acacacccggaggagctgtttaagatattggacaatgcagtgaaagagaagtatccaatt
gtgatagttgccgaggggattgagcaggaagctttaactccagtaataagaaacaagctc
agaggtgcactgaaagcagtcgccattaaggcgcctgccttcggtgaacgcaaaagccac
tacttagacgacattgccattttgaccggagcaacagttgtaagagaagagatgggaatg
attttacataagactggcccggaggtattggggactgctactaaggttgtgataacaaag
gactctacactgatagttactgatggaagcactcgagaagctgttgacaagagggtttct
cagatacaaaggcttgttgagaacactaaagaagaatttcaaaagaagatattaaatgaa
agaataggaagattatcaggggggattgctattctgcaggtaggagcacaaacgcaagtt
gagttgaaggataaacaactcagaattgaagatgctttgaatgcaaccaaggcagcaatt
gaggaaggtgttgtagttggtggtggctgctgccttttgaggctctcgaaaaaggtggat
gccatcaaagaagttttggaaaatgaagaacagaagattggagcggaaatattcaagaaa
gctctaagctatcccgcaaaactgatagctaaaaatgcaggtgtaaatggcagtgttgta
gtagagaaggttctatcaaatgctgatnatgggtacggatataatgctgcaagagactgt
tatgaggacctaatgaaagctgggattatggatccatcaaaggttgttagatgttgtttg
gagcatgctgcatcagtcgcaaaaacttttctgttgtctgatgctgttgtcgtcgagatt
aaggaattgaatcccatcccaagaagaatgccaaggcgaaggccaaagccaccccttccc
cccatgccccaaatgccacagatgccgccaatgccaccaatgtccatgccaacctcaggt
gctcgatcatttggttccaagtatggcagatga
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