Rosa chinensis (China rose): 112199415
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Entry
112199415 CDS
T06020
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT3 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00270
Cysteine and methionine metabolism
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
112199415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112199415
03032 DNA replication proteins [BR:
rcn03032
]
112199415
03036 Chromosome and associated proteins [BR:
rcn03036
]
112199415
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rcn02048
]
112199415
Enzymes [BR:
rcn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
112199415
Transcription factors [BR:
rcn03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
112199415
DNA replication proteins [BR:
rcn03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
112199415
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
112199415
Prokaryotic defense system [BR:
rcn02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
112199415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Chromo
BAH
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
112199415
NCBI-ProteinID:
XP_024196204
LinkDB
All DBs
Position
4:14943319..14951554
Genome browser
AA seq
817 aa
AA seq
DB search
MATKRKTRSLSASASSSDSKKGGQTDQQQRLTRRAVGDGDGPEPKFIGPPLQDDDARKRW
PKSYADKKMQVSGLNSTNKDENSVQARCHYAKAEVDGIVYDLYDDAHVKASEGEEPYICK
VLEFFTAIDGSMYFTAQWYYRARDTVIKDCAVIDPKRIFFSEIQDTNPLECLLGKLNIVR
LPLDVDFDGKSKLIPECDYYCDTKYLLPYSSFVNLPAEIVLAGIDTSSAISNGVNSELPQ
GCSSRESSKPEVRLLDLYSGCGAMSTGLCLGACSAGVNLVTKWAVDVNKHACESLKFNHP
ETMVRNESAEDFLSLLKQWEQLCICFNFVGTNESEKHGFNFFFKTEDTEDEDEIIGTDNE
ASEVYEVAQVLEICYGDPNHIKERGLYCKIRWKGYGADEDTWEPIEELSHCKERVQEFVS
QGYSSNLLPLPGDVDVICGGPPCQGISGFNRFRNEEDPLEDEKNKQLKVFMDLVQYLKPK
HVLMENVVDLVKFADGFLGRYALGRLVHMNYQARMGIMAAGAYGLPQFRLRIFMWGARPT
ERLPQYPYPTHDVVVRGCIPTEFERNTVAYDEGHNVKLEKKLFLADAISDLPPVENSENQ
DEMPYGEPPQTDFQKCIRLSKNYMLQLSVSEPWNETLYDHRPLKLNEDDYARVCLVPKKK
GGNFRDLLGVHVRGGVVEWDPDVDREYLDSGKPLVPNYAVSFRNGTSKKPFARLWWDETV
PTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLSGPVKQRYIQVGNAVAVPVS
RSLGYALGRAVRGISDDEPLFTLPEKFPYPPEQIPLV
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaagcggaagacgaggtcgctttcggcctcggcatcgtcttctgattcgaag
aagggcgggcaaaccgatcagcagcagaggttaaccaggagagctgttggagatggtgac
ggcccggagcccaagttcatcggcccaccgcttcaagacgacgacgctcgcaagcgatgg
cccaagagctacgctgacaagaagatgcaggtatctgggctaaatagtacaaacaaagat
gaaaattctgtccaagctaggtgtcactatgccaaagcagaggtggatgggattgtttac
gatctatatgatgacgctcacgtaaaagcaagtgagggggaagaaccctacatttgtaag
gttctagaatttttcactgcaattgatgggtcaatgtattttactgcacaatggtactac
cgagcgcgagatactgtcataaaagattgtgctgtcatagatcctaaaagaatttttttt
tcggagattcaagacacaaaccctttggaatgccttctggggaagcttaatattgtcaga
ttgcctttagatgtcgattttgatggaaaaagtaaattgattccagagtgtgactactat
tgcgatacaaaatatttgttaccttattcaagttttgtcaatttgccagcagaaattgtg
ctggccggaattgatacctcttccgcaatttctaatggtgttaattctgaacttccacaa
ggttgctccagtagagagtctagtaaaccagaagtcagattgctagatttatattctggc
tgtggcgcaatgtcgactggcctatgccttggtgcatgttctgctggcgttaatcttgtt
actaaatgggcagttgatgtgaacaagcatgcttgtgaaagtctgaagtttaaccatcct
gaaacaatggttcggaatgaatctgccgaagattttctttcattgctaaaacaatgggaa
caactctgcatctgttttaactttgtcggaacaaatgaatcagagaagcatgggttcaat
ttcttctttaaaacagaggatactgaagatgaagatgaaataattggcactgataatgaa
gcttcggaagtctatgaagtagcacaagtactagaaatatgttatggtgatcccaaccat
atcaaagagaggggattgtactgtaagatccggtggaagggctatggtgctgatgaggac
acctgggagcctattgaggaactgagtcattgtaaagagcgggtacaagagtttgtttct
cagggttattcatcaaacctattgcccttacctggtgatgtggatgtgatctgtggtgga
ccaccatgccaaggaataagtggatttaacaggtttaggaatgaagaagatccattggaa
gatgaaaaaaacaaacaattgaaagttttcatggatttagttcagtaccttaagcccaag
cacgttttaatggaaaatgtggttgacctcgtgaaatttgctgatgggttccttggtcgt
tatgcattgggacgtcttgttcacatgaactatcaagcaaggatgggcatcatggcagct
ggggcatatggacttccacagtttcgtttgcgtatctttatgtggggagcccggcctact
gagaggttgcctcaatatccatatccgacacacgatgtcgtagtaaggggttgtatacct
actgaatttgagagaaatactgtcgcttatgatgagggtcataatgtcaaactagagaaa
aagctcttcctggcggatgcgatttctgatctcccccctgttgagaatagtgaaaaccag
gatgaaatgccctatggggaacctccccaaacagattttcagaagtgtatcagactcagc
aagaattatatgctgcagctttcagtcagtgaaccctggaatgagacgctatatgatcat
cgtccgttaaagctgaacgaagatgattatgcacgtgtctgcctagtacctaagaaaaag
ggtgggaactttagagatctactgggtgttcatgtgcgtggtggtgtagtggagtgggat
cctgatgtagacagagagtatttggattcggggaaaccattggtacctaattatgctgtg
agtttcaggaatgggacttcaaaaaagccttttgctcggttgtggtgggatgagactgta
ccaacagtcgttacacgggccgagccacataatcaggcgattctgcatcctgaacaagat
agagtgttgtcaattcgtgagaatgcacgtctacagggctttccggactactataagctt
agtggtccggtaaagcagaggtacattcaagtcggcaatgctgttgcagttcccgtttca
aggtcattaggatatgcgttaggtcgtgcggttagaggtatctcggacgatgaaccacta
tttactttgcctgagaaattcccttaccctccggagcagattcctcttgtgtga
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