Rosa chinensis (China rose): 112199446
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Entry
112199446 CDS
T06020
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 27 homolog
KO
K24935
tetratricopeptide repeat protein 27
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rcn04990
]
112199446
Domain-containing proteins not elsewhere classified [BR:
rcn04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
112199446
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_17
TPR_14
TPR_CcmH_CycH
TPR_8
TPR_16
TPR_19
TPR_11
TPR_15
TPR_10
DUF7017
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
112199446
NCBI-ProteinID:
XP_040374661
LinkDB
All DBs
Position
1:complement(7429671..7454867)
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AA seq
753 aa
AA seq
DB search
MNFPAIIPSIESGRYLEAFTSADANRLVFKLTDSDSLGDHDADRVYSELLRRVESFICEE
AEDNGKDQAYRVVVILCIAVAALLAFTQSNLTGPLEGLPRCPLPMEVPLCNEWDNCARNQ
LMAAGSDLLGKVYNIQYIIYAKILVMKMKDLLFEGSLSCAYGIRSLSWWLARVTFLHQRI
LDERSSSLFNLLHVFTSETLNHFGTLEKVTSYWGNDLRNGEGSTLVSVIHLEAGMMEYIY
ARVDSCRLHFESAEAAAGVKLSVTGVLGFRTIHQVEPKAQMVLLANTTSSKSGALCSSES
PGPHRYNSIGRNDISKHPSESHEASDILLTPRLVENESESGVISDGIQVGGTAADPLSAI
QQAVILAKCLLIEKSTRHDDMQRWEMAPYIEAIDSXLSSYFIILRCCDVLRIRCWESRCS
HTKERALMMMETLVQGINDPSPGVAVRIPFCYGIYIPTVSALRKEYGELCVRCGLIGEAV
KIFEDLELWDNLIFCYSLLEKKAAAVELIKTRLSETPNDPRLWCSLGDVTDDDACFEKAL
EVSNDRSARAKRSLARSAYNRGEYRTSKLLWESAMALNSLYPDGWFALGAAALKDRDIEK
ALDGFTRAVQLDPENGEAWNNIACLHMIKGKRKEAFIAFREALKFKRNSYQLWENYSHVA
LDVGNVAQALEATRKVLDLTNNKRIDAELLERIMTEVESMASPTNSAMTDDGDNFPVSGT
TNAESDVGKSREAEHLVEFLGKVLQQVLEASCC
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcctgctatcattccttccatcgagtccggccgatacctcgaagccttcacc
tccgccgacgcaaaccggctcgtcttcaaactcaccgattccgactcactcggcgaccac
gacgccgaccgagtctactccgagttgctccgccgcgtggagtcgttcatatgcgaagaa
gctgaggataatgggaaggaccaggcctatagagtcgtcgtcatactctgcattgccgta
gctgccttacttgctttcactcagtctaacctaaccggacctttggaggggctgccaagg
tgtccgttgccaatggaagtgcccttatgcaatgaatgggacaattgcgcgcggaatcag
cttatggctgctggctctgacttgcttggaaaggtctataatattcagtatataatttat
gcaaagatattggtcatgaagatgaaagatttgttatttgaaggaagtttgtcttgtgca
tatggaattaggagcctttcatggtggctcgctagggtcacctttctccatcagcgcatt
ctcgatgagcggtcttcatctctgttcaaccttttgcatgtctttacaagtgaaactttg
aatcattttggcacgttggagaaagtaacaagttattggggtaacgatttgcgtaatggc
gagggatcgacactcgtctcagtgattcatctggaagctggaatgatggaatacatctat
gcacgtgttgattcatgcaggttgcattttgaatcagccgaagcagcagctggtgttaag
ctttcagttaccggggttcttggcttccgtaccatacatcaggttgaaccaaaggcacaa
atggtacttttagcaaacacaacttcatcaaagagtggggctctctgttcctctgaaagc
cctggccctcatagatacaattctattggcagaaatgatatatctaagcatccatctgag
tcccatgaggcttctgatatattattgactccaagattggtagagaatgagagcgagtct
ggagttatatcagacggcattcaagttggtggtactgctgctgaccctttgagtgcaatc
cagcaggcagtgatcctggctaaatgccttctaattgagaagagcacgcgacatgatgac
atgcagagatgggaaatggctccatacatcgaggcaattgattcttagctatcatcatat
tttattatactacgatgctgtgatgtcctacgtattcggtgctgggagtcgagatgtagt
cacacaaaggaacgtgcattgatgatgatggaaacattggttcagggcatcaacgatccc
tctccaggagtggcagtcaggattcctttctgctatgggatttatatccctacagtttca
gccttgcggaaggaatacggtgaactttgtgtccgctgtggtctgataggagaggcagtc
aaaatttttgaggacttggaattatgggataatctaatattctgctatagcctattggag
aaaaaagcagcagctgttgaactgatcaagacacggctttctgaaacacctaatgacccc
aggttatggtgttcgttgggtgacgttactgatgatgatgcctgctttgaaaaagcccta
gaagtctcaaacgataggtcggctcgggctaagcggtctcttgcgcgcagtgcatacaac
aggggggaatatagaacatcaaaacttctgtgggagtctgcaatggccttgaattctctg
tatcctgatggctggttcgccctaggggctgctgcattaaaggatagggatattgagaag
gcactagatggctttacacgggctgttcagctagatcctgaaaatggggaggcatggaat
aatatcgcctgtttgcatatgataaaagggaagagaaaagaagctttcattgcatttaga
gaagcactgaagttcaaacgaaacagctatcaactgtgggagaactacagccatgttgct
ttagatgttggcaatgttgctcaggctctagaagctacgcgtaaggtgttggatcttact
aataataagagaattgatgctgagttgttggaaagaattatgacagaggtggaaagcatg
gcttcacctactaattcagcaatgactgatgatggagataactttcccgtcagtgggacc
acaaatgcagaatctgatgtgggaaaatctcgggaagctgagcacttagtagagtttctt
ggaaaagttctacaacaggtgcttgaggccagttgttgctga
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