Rosa chinensis (China rose): 112199471
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Entry
112199471 CDS
T06020
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Module
rcn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112199471
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
112199471
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Pectate_lyase_4
NosD
DUF5123
Motif
Other DBs
NCBI-GeneID:
112199471
NCBI-ProteinID:
XP_024196256
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Position
4:49162533..49164502
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AA seq
431 aa
AA seq
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MAINAGMSWRSHAFLIVCLVPLAHLATARERQIIPPVLPDVFRGNNLARHGRADPTEKIF
NVLDFGAVADGKKDSAIYFIRTWIAACRGTHTGKSRVVIPEGTFKAGPVIFQGPCTCAKP
IIVEIKGTVLGANDLSLYEEPYWILFEKVDGVIVTGKGTLNGQGSSVWKNVESCSGSDCS
PLPSNLKFNGVTNGLIRGINSINPKGVHIFITDSQNIRVRAVYIEAPGTSPNTDGIHISD
SNNVRIARTHISTGDDCVGMIQGSTNIAINKVFCGPGHGISVGSLGKYETENDVRGIIVK
NCTFANTDNGIRIKSWPGSQPSQATGMIFQDLIMQNVRNPIIIDQEYGCNGKCNKAPSKV
KISNVHYINVKGTTSSDIAVDLICSSQSPCENIELRDIDLKYVGPKKVRSTSLCKHAKIG
YGGIQNPPACR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggctatcaatgcaggaatgtcttggcggagccacgcctttcttatcgtgtgcttagtt
ccactagcccatcttgcgaccgcccgtgaaagacagataattcctccggtattacccgat
gttttccgcggcaacaatttggctcgccatggtagagctgatcccactgagaaaatcttc
aacgttctagattttggcgccgtggccgatggaaagaaagattcagccatttatttcata
cgaacatggattgcggcgtgccggggtactcacactgggaaatcaagggttgtgattccg
gaagggacgttcaaagcagggccagttatatttcagggtccatgcacctgcgcgaaacct
ataattgttgaaattaaagggaccgtattaggagccaatgacttatccttatatgaagaa
ccatactggattttatttgaaaaggtggacggagtgatagttacaggcaagggtactctt
aatggccaaggttcaagtgtctggaaaaacgttgagagctgcagcggtagcgactgcagt
ccactcccatcgaacctaaaatttaacggagtcacaaacgggctcatccgcggcatcaat
tcgataaaccctaagggagtgcacattttcatcacggacagccagaacattagggtgcga
gcagtctatatcgaagcgcccggaactagccctaacaccgatggcatacacataagtgac
tcgaacaacgtgaggatcgccagaactcacatttctaccggggatgactgcgtcggtatg
attcagggatccaccaacattgccatcaacaaagtcttttgcggacctggacatggaatc
agcgttggtagccttggcaaatacgagactgaaaatgatgtgagagggatcattgtcaag
aactgcacttttgccaacacggacaacggtatcagaatcaagtcgtggcccggatcgcag
ccaagtcaagctaccggcatgattttccaggacctaatcatgcaaaatgttaggaacccc
atcataatcgaccaggagtatggttgtaacggcaaatgcaacaaagcgccatcgaaagtg
aagatcagtaatgtgcattatatcaacgttaagggaaccacatcatcggatattgcagtg
gacctgatttgcagcagccagtctccttgtgaaaacattgagcttcgtgacattgatttg
aagtatgtgggtccgaagaaagttcggtctacctctctgtgcaagcatgcgaaaatcggt
tatggtggcattcaaaacccaccagcttgccgttga
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