Rosa chinensis (China rose): 112199786
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Entry
112199786 CDS
T06020
Name
(RefSeq) SNW/SKI-interacting protein
KO
K06063
SNW domain-containing protein 1
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112199786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcn03041
]
112199786
Spliceosome [BR:
rcn03041
]
Complex B
Other components
Prp19-related factors
112199786
Complex C
112199786
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
112199786
NCBI-ProteinID:
XP_024196520
LinkDB
All DBs
Position
4:65653632..65656210
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AA seq
548 aa
AA seq
DB search
MDEHVVVSSMVCPRYFRIPCVFEIRSTNTHPYDHIIKLIRRLGVHSNYQWFKERISSNTM
TSSVLPTNLLDFRDGGAFPEIHKPQYPLGMGKEGTKSSKLQSKSLPVSFDAYGNIAYDVI
VKQNENAKRTVFSKHKDLVPLILTDNEEEENMYSDEEMQKENEKTTIETKAALEKIVNVR
LSAARPKSQPKQTQDSKLIKYRPSQTSVAFNSGAKERMIRMVEKPVDPLEPPKFRHKRVP
WAPEEPPVPVLHSPPRPVSAADKKDWSIPPCISQFKNPKGYTIPLDKREGVDGRRLQDVQ
ISENFAHLHDSLHVALVKCKEELDLRERVQMERMEKEQERRNQELRDIAQRARAERTAIA
AATPEPNGEKTAMDTDETKEERLKRDEIRRERERERTLTKNKRTTVTRDGDRDICEKIAL
GMASTGVGGERGEEVMYDQRLFSQQKGMHSGFGNDDQYNVYEKRLFTAQSTLSSLYRPKK
DVDADTYGGADEQLDKIMKTDRFKPHNGFGGTTERAGPRDRPVEFDQDVKEADPFGLDEI
MAKMNKAR
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcatgtagtggtctcctccatggtttgtcccagatatttccgaatcccttgc
gtgtttgaaatacgcagcacaaatacacatccatatgaccatatcataaaactaattcga
cgacttggtgtccactcaaactatcaatggttcaaggagaggatcagtagtaatacaatg
acttcttcagtccttcctaccaatttattggatttccgtgacggcggtgctttcccggag
attcataaacctcagtaccctcttggcatgggcaaggagggcaccaagtcctcaaagctc
caatccaaatctcttccggtttcttttgatgcatatggaaacatagcctatgatgtcatt
gttaagcaaaacgaaaatgccaaaagaactgtgttctcaaagcataaagaccttgtgcct
ctaattttgacagacaatgaagaggaggagaacatgtatagtgacgaggagatgcagaag
gagaatgaaaaaaccacaatagaaacaaaagctgctcttgagaagattgttaatgtgaga
ctgagtgctgcaaggccaaaaagccaaccgaaacagacccaagactcgaaactgatcaag
tacagaccatcacagacgtcggtggcattcaactctggtgctaaggagaggatgataagg
atggtggagaagcctgtggatccacttgaacctcccaagtttcggcacaagcgtgttccg
tgggctcctgaagagccgcctgtcccggtgctacattctcctcctaggccggtgagtgcg
gctgataagaaggactggagtattccgccttgtatttcacagttcaagaacccgaaaggg
tatacaatcccattggacaaacgcgaaggggttgatgggagacgccttcaagatgttcag
atcagtgagaactttgcacatcttcatgactctttgcatgtagcactagtgaaatgtaag
gaggaacttgatctaagagagagagttcagatggagaggatggagaaggagcaggaaagg
agaaaccaggagctgagagatatagctcagagagctcgtgcagagagaacagctattgct
gctgctactccagagcctaatggtgagaagacggcaatggatactgatgaaacaaaagaa
gagagattgaagcgggatgagattcgtcgagagagggaaagggagagaacgttgacaaag
aataagagaacaacagtcacaagagatggcgatcgtgatatctgtgagaaaattgctctt
ggcatggcttctactggagttggaggggaaagaggggaagaggttatgtatgaccaaagg
ttgtttagccagcagaaaggaatgcactctgggtttggcaatgatgaccagtacaatgtc
tacgagaagcgcttgtttactgctcagtctacactctcgagcctgtacaggcctaagaag
gatgtagatgctgatacctatggaggtgctgatgagcagttggataagatcatgaagact
gatcgcttcaaacctcacaatggatttggaggaactactgaaagggcaggtccgagagat
agaccggttgagtttgatcaggatgttaaagaagctgatccctttggtcttgacgagata
atggcaaagatgaacaaggcaaggtga
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