Rosa chinensis (China rose): 112200027
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Entry
112200027 CDS
T06020
Name
(RefSeq) isoamylase 1, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00500
Starch and sucrose metabolism
rcn01100
Metabolic pathways
rcn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112200027
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
112200027
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ISOA1-3_C
Alpha-amylase
CBM_48
GHL10
Motif
Other DBs
NCBI-GeneID:
112200027
NCBI-ProteinID:
XP_024196790
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All DBs
Position
4:14698929..14708543
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AA seq
790 aa
AA seq
DB search
MEHLTTWSSAPRLHSHHHRLFASNARLRSRSPNRLNWRMLGLRRGGAPSAVKASDGGAAV
DTAVAERPKLRRFQVSEGHPTPFGATLRDGGVNFAVYAGNAVSATLCLITLADLEQDKVT
EQIPLDPVNNKTGNVWHVFLTGDVKDILYGYKFDGKFSPQEGHYYDSSKIVLDPYAKAVI
RRGEFGSLGPDGNCWPQMACTVPSFDDKFNWEGDLPLKYPQKDLIIYEMHVRGFTRHESS
MTELPGTYCGLVEKLDHLKELGINCIELMPCHEFNELEYFGYNSVLGDYKVNFWGYSTVS
YFSPMIRYSSAGTRNCGRDAINEVKFLVKEAHRRGIEVIMDVVFNHTAEGNENGPILSFR
GADNSVYYMLAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASI
MTRGTSLWDSTNVYGSLIEGDLLTTGTPLASPPLIDMISNDPILHGVKLIAEAWDAGGLY
QLGMFPHWGIWSEWNGKYRDTVRQFIKGTDGFSGALAECLCGSPNLYQEGGGRPWNSINF
ICAHDGFTLADLVTYNNKHNLANGEDNNDGENHNNSWNCGQEGEFTSISVKKLRKRQMRN
FFVCLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYINYFRWDKKEESSSDFFRFCCLMT
KFRQECESLGLNDFPTAERLQWHGLSPGQPDWSKTSRFVAFTLVDSVKREIYIAFNASHL
PVNISLPERPGYRWEPLVDTSKSSPFDFLSSGLPQRDIAVKQYAHFLDANLYPMLSYSSI
ILLLAPVEDA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggagcacctaaccacttggtccagtgctcccagactccactctcaccaccaccgcctc
tttgcttccaatgcaaggctccggagccgaagccccaaccgtctcaattggcgaatgcta
gggcttcggagaggcggtgctccgtcggcggtgaaggcaagcgacggaggcgcggcggtg
gataccgcggtggccgagaggccgaaactgcgtcgttttcaggtctccgaaggtcatccg
actccctttggcgccacgctccgcgacggtggggttaacttcgctgtctacgccggcaat
gccgtttccgccactctctgtttgatcactctcgccgatttagagcaggataaagttact
gagcagatccctcttgatcctgtgaacaataagactggtaatgtgtggcatgtatttcta
actggagatgtcaaagatatcctgtatggatacaaattcgacggcaagttttctccgcaa
gagggacactactatgattcgtcaaagattgtattggatccttatgcaaaggcagttata
cgccgaggtgaatttgggagtctaggtcctgatggtaattgctggcctcaaatggcctgc
acggtaccttcttttgatgataagttcaactgggaaggagatttacctctgaagtatcca
caaaaagatcttatcatatatgaaatgcatgtgcgaggttttacaaggcatgaatcgagc
atgactgaattgcctggtacatactgtggtttggtggagaagcttgatcacttaaaggaa
cttgggatcaactgtatagagttaatgccatgtcatgagttcaatgaactggagtacttt
ggctacaattctgtcttgggtgactacaaggtaaatttttggggatattcaactgtcagt
tacttttcaccaatgataagatattcatccgctggcacacgtaattgtggccgtgatgca
ataaatgaagtcaagtttcttgttaaagaagcacatagacgtggaattgaggtgatcatg
gatgttgttttcaatcacacagctgaagggaatgaaaatggtcccattttgtcttttaga
ggtgctgacaacagtgtctattacatgctcgcccctaagggagagttttataattattca
gggtgtggtaacacattcaattgcaaccatcctgttgtgcgacaattcatagtagattgc
ttgagatattgggtaacagagatgcacgtggatgggttccgctttgatcttgcttctatt
atgaccaggggtaccagtctctgggattcaactaatgtatacgggagtctgatagaaggt
gacttgttgacaactggaacccctcttgctagccctccattgattgacatgattagtaat
gacccaatacttcatggagtgaagctgatagctgaagcttgggatgcaggaggcctgtac
caacttggcatgtttcctcactggggtatttggtcagaatggaacgggaagtatcgtgac
acagtgcggcagtttatcaagggtacagatggcttttctggggctttggccgaatgcctt
tgtgggagccctaatttgtaccaggaagggggagggagaccatggaacagtatcaatttt
atttgtgcacacgatggttttactttagctgatttagtaacctataacaacaaacataac
ctggcaaacggagaagacaacaatgacggagagaatcataataatagctggaactgcgga
caggagggagaattcacaagcatttcagtgaaaaaactgaggaagcgacaaatgcggaat
ttttttgtctgcctcatggtttcccaaggtgttccaatgatatatatgggtgatgagtat
ggtcatacaaaaggggggaacaacaacacatattgccatgataattatattaattacttc
cggtgggataagaaggaagagtcttcatcagattttttcagattttgctgtcttatgacc
aaattccgccaggaatgtgagtcacttggtttgaatgacttcccaacagcagagagactg
cagtggcatggtctttctcctgggcagccagactggtctaaaacaagccgctttgtggcc
tttactctggttgactcagtgaagagagagatctacattgccttcaatgccagtcattta
cccgtgaacatttcactgccagagaggcctggatacagatgggaacccttggtagacact
agcaagtcttcaccctttgacttcctatctagtggcctcccacaaagagatattgcagtt
aaacagtatgctcactttcttgatgccaatttatacccgatgctaagttattcttcaatc
atcctattgctcgctccagtcgaagatgcttag
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