Rosa chinensis (China rose): 112200363
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Entry
112200363 CDS
T06020
Name
(RefSeq) CCR4-NOT transcription complex subunit 9 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112200363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112200363
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112200363
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
DUF2249
Motif
Other DBs
NCBI-GeneID:
112200363
NCBI-ProteinID:
XP_024197155
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All DBs
Position
4:66860797..66865880
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AA seq
319 aa
AA seq
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MANRSQSLSINVPYGGPSVSAPTIAGSQANKDRKMASAELLVLDLSNPDLRENALLELSK
NKELFQDLAPFVWKSFGTIAALIQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHP
DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
PLCLRTMEMGSELSKTVATFIVQKILLDDMGLDYICTTAERFFAVGRVLGNMVAALAEQP
SSRLLKHIIRCYLRLSENPRACDALRSCLPDMLRDATFSTYLVEDPTTRKWLQLLLQNVG
GSRIPSLQAGGGFDHMMLN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcggtcccagtccctttcaataaatgtaccgtatggaggtccaagcgtttcg
gcaccaaccatcgctggatctcaagcaaacaaggatcggaaaatggcatcggcggagctc
ttggtgcttgacctaagtaatccagatcttcgagaaaatgcgcttcttgaactttctaag
aacaaggaattatttcaagatttggctcctttcgtgtggaaatcttttggtactattgct
gcactcatacaggagatagtttcaatataccctgttctgtcgccaccaaatctgactccg
gcacagtcaaatcgagtttgcaatgctcttgctcttcttcagtgcgtggcttcccaccca
gatacaaggatgctgttcctcaatgctcatatacccttatatttgtatcctttcctcaat
acaacgagcaagtcaagaccatttgagtacttgaggcttacaagtttaggtgtcatcgga
gccttagtcaaggttgatgatacagaagttattagtttccttctgtcaacagaaataatt
ccattgtgccttcgtaccatggaaatgggcagtgaactctcaaaaacagttgccacattt
attgttcaaaagattttgttggatgatatgggcttggattatatttgtacaacagcagag
cggttttttgcagttggtcgagtgttagggaacatggttgcagcacttgctgagcaaccc
tcgtcacgcctactgaaacatataattcgatgttaccttcgattgtcagaaaacccaagg
gcttgtgatgctttaagaagttgccttccagatatgttaagagatgctacttttagtact
taccttgttgaagatccaacaactaggaaatggctgcaattgttgctccaaaatgttgga
gggagccggattccttcgctacaagctgggggaggatttgatcacatgatgctgaattaa
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