Rosa chinensis (China rose): 112200394
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Entry
112200394 CDS
T06020
Name
(RefSeq) tRNA pseudouridine synthase A 1 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112200394
Enzymes [BR:
rcn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
112200394
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112200394
Prokaryotic type
112200394
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
112200394
NCBI-ProteinID:
XP_024197193
LinkDB
All DBs
Position
4:52871068..52873339
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AA seq
326 aa
AA seq
DB search
MSSTSVLVAGLPCHPNLNATLSSPTPTNTSNAKDGDNLVMKVDGFKWRLVIAYDGTRYAG
WQYQSSPPTIQRYVEKALMGATKLERKDLHLVGASRTDKGVHAWGQVAHFVTPFNYDRIE
SIHAALNGTLPEDIRVREISPAVPEFHARFSAQRKVYHYRIYNDTFMDPFQRHNAYHSAH
KLNPAVMREAAKYFIGKHDFSAFVNASQKERVRDPVKDIFRFDVVQMGALLQLEVEGSGF
LYRQVRNMVALLLQIGREAVPTDIIPKILATRNRRELAKYSLLAPPQGLCLMAVEYNEDH
LRLPPGSPNPSFGRHYTIKSCKLPFY
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcactagtgtattagttgcaggccttccctgtcatccaaaccttaacgccact
ctttcttctccaactccaactaatacatcaaacgcaaaggatggagacaatttggtaatg
aaggttgatgggtttaagtggcgtttggttatagcttacgacggcacccgttatgcagga
tggcaatatcagagttcaccacctaccatacagcgctatgtggagaaagctctaatggga
gcaacgaagctggaaaggaaggatcttcatttggttggtgcaagtaggacagataagggt
gtgcatgcatggggtcaggttgcacactttgtcacaccgttcaactatgacagaatagaa
agcattcatgcagctctcaatggtactcttccggaggatatccgtgttagggaaattagt
cctgctgtgcctgaattccatgctcgtttttcagcccaaaggaaggtgtatcattacaga
atatataatgacacattcatggacccatttcagcgtcacaatgcttaccatagtgctcat
aagctgaaccctgctgttatgagagaagctgcgaagtattttattggaaagcatgatttc
tctgcttttgtaaatgcatcccagaaggagcgagtgcgggatccagtaaaggatatattc
cgttttgatgttgtccaaatgggggctcttttacagcttgaagttgaaggctcgggattc
ttatatagacaagtccggaacatggtcgctctgctacttcaaatcggaagggaagcagtt
cccactgacatcatacccaagatattggcaacacgaaatcgaagggagcttgctaaatat
tccttgttggctccaccccaagggctttgtcttatggcagtggagtataacgaggaccat
ctacggcttccacctggttcccctaaccccagttttggtaggcattatactataaaatct
tgtaagcttccattctactaa
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