Rosa chinensis (China rose): 112200401
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Entry
112200401 CDS
T06020
Name
(RefSeq) nuclear transcription factor Y subunit B-4
KO
K08065
nuclear transcription Y subunit beta
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcn03000
]
112200401
Transcription factors [BR:
rcn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
112200401
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
Bromo_TP
CENP-T_C
TFIID_20kDa
Motif
Other DBs
NCBI-GeneID:
112200401
NCBI-ProteinID:
XP_024197199
LinkDB
All DBs
Position
4:complement(47360850..47361618)
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AA seq
164 aa
AA seq
DB search
MVDNIGGSAPNICDHGQGDIKTEQPDQLLPIANVGRIMKQILPPNAKISKEAKETMQECV
SEFISFVTGEASHKCQKEKRKTVNGDDICWALATLGFDNYAGPLRRYLHRYRDQEGAEHI
ANDNNNNEDKLKLLVNNILSTDQEQRIIMIMNQYDHPHHDIQKT
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atggtagacaatattggtggaagtgctcccaatatctgtgatcatggtcagggagatatc
aagaccgagcagccagaccaattgctccccatagccaacgttgggaggattatgaagcaa
atcctgccaccaaacgccaaaatctcaaaggaagccaaggaaacgatgcaagagtgcgtc
tccgagttcatcagcttcgtcactggagaggcctcgcacaagtgccaaaaggagaaaagg
aagacggtgaacggcgacgacatctgctgggctctggcaaccctgggattcgataactac
gccggaccgctgaggaggtatttacacaggtatagagatcaagaaggagctgagcacata
gctaatgataacaataataatgaagacaaactgaagctgctggttaacaacatcttgagt
actgatcaagaacaaaggatcatcatgatcatgaaccaatacgatcatcctcatcatgat
atccagaagacctaa
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