KEGG   Rosa chinensis (China rose): 112200437
Entry
112200437         CDS       T06020                                 
Name
(RefSeq) DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112200437
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    112200437
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN ResIII zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 DEAD RING_XB3-XBAT31 zf-C3HC4_3 DEAD_2 zf-RING_2 zf-RING_5 Prok-RING_4
Other DBs
NCBI-GeneID: 112200437
NCBI-ProteinID: XP_024197235
LinkDB
Position
4:complement(6859469..6865358)
AA seq 998 aa
MSMINQEDSDEPETFAGSKRKSLPNSEGSIKRAKPISTHHIKQKQVCEEEPIEAETGLGS
NDPRIRVKQEAPDAQQGLTHQQENVMNRITGARISRSEEESNNGSKPKRVKKEVADCELI
SVQHVRPQNLEDGDFKIEPDWFLVGSTLVTAVSTSKGMKLLDNEIVHLSFPTSNSSYKTQ
WIVRFSTKRSGEIGRFPMEWAKCVVPLVNSGKVKVLGRFMGAPKFLSMIQDIILSVSFFI
HHSIFTDGDNYTVPPLLGVLNLLKIEPYQKAEFTAEELDSQKCILDLQHIPDQATSVLRL
VKRGRGCQQYREENKDEEAISESSINKTGDAADVYDFEEMASALMSDLSPYQKQALYRML
ELEKGIDVEISAHTLHPCWVGYRICDERASSIYVNIFSGEATTQFPTIIQMARGGIIADA
MGLGKTVMTIALIIARPSREGSKNIEITKRQIDSHRSTPWKPKGGTLVVCPESFLSQWKD
ELETHSESQGISFLVFVRGRDNNNKMISEKDVVLTEYDILADAYAKDKENSIFHQVDWYR
VVLDEAHNIESSCPQYAEAASTLSSHCRWCLTGTPLQINLDDIYSLLCLLNVEPWCDWMW
WNKLIQMPYESGDPRGQRLLKAILSPLMLRRTKETKDKDGRPILVLPPDIHNIQCDQLEA
EHEFYEALFHRSKVQFEQIVAQGKVLHNYSSVLELLLKLRQCCSHPCLVMRGDSHKFADS
DKLARRSLESNHDSLIANQIISTQACIEEVVKGICGGKSIKCPICLDFADDPVRTPCAHQ
MCRECLLSSWPRPSFGQCQVCFNWIGKTDLITCKSENHCQSDIKEILKESSKVSKLLECL
KHIVDSGSNEKSIVFSQWASFLDLLETSMKRRGIGCVRFDGKLPDMHRDRALAEFSKTTD
KMVLLMSLKTGGDSLDLTAASNVFLMDPPWNPDVEEEAIMRILRNRRKRTAFIRFIVKDT
VEERLQQVQARKQRMIAGALTDNEVQSARIEELKILFA
NT seq 2997 nt   +upstreamnt  +downstreamnt
atgtctatgatcaaccaagaagactcggatgaacccgaaacgtttgccgggtctaagcgt
aagagcttaccgaacagcgagggttcgatcaaaagggcaaaacccatttcgacccatcac
atcaagcaaaaacaagtctgtgaggaggagccgattgaggccgaaaccggtcttgggtct
aatgaccctaggatacgagtaaagcaggaagctcctgatgcccaacagggtttgacccac
cagcaagagaatgtgatgaatagaatcacaggggctcggatttccaggtctgaggaggag
tcgaataatgggtcgaagcctaagagggtgaagaaggaagttgctgactgtgagttgatt
tcggtgcaacatgtaagacctcagaatttggaggatggcgatttcaagattgagccggat
tggttcttggtgggaagcacattggttacggcggtttcgactagtaaaggcatgaaattg
ttggacaatgagattgttcatctctcttttcccacctcaaattccagctacaaaacccaa
tggattgtgcgtttctcaacgaaaagatcaggagagattggtcggtttccaatggaatgg
gcaaaatgcgttgttcctcttgtgaattctggtaaggttaaagttcttgggcggtttatg
ggtgcgccgaagttcctatctatgatccaagatatcatattgtctgtaagtttctttatc
caccattcaatttttacggatggagataattatacagttcctcctctcctcggtgtctta
aatttgctaaaaatcgaaccatatcagaaggcagaattcactgctgaagaacttgattcc
cagaaatgcattttggatcttcaacatattcccgatcaagctacatcagttttgcgacta
gtaaaacgaggaaggggttgccaacagtatagagaagaaaacaaagatgaagaagccatt
tcagagtcatcaataaataagactggtgatgcagccgatgtatatgactttgaggagatg
gcaagtgctctcatgtctgatctgagtccataccagaaacaagctctctatcggatgttg
gaattagagaaggggattgatgttgagatatcagcacacactcttcatccttgctgggtg
ggatatcgtatatgtgatgagagggcttcttcaatctatgtcaacatcttctcaggggag
gcaaccacacaatttccaaccataatacagatggcaagaggaggaattattgcagatgca
atgggacttgggaagactgtgatgacaattgctctgataatcgcaagaccaagcagagaa
ggctccaaaaatattgaaattacaaagaggcagatagattcacatagaagcaccccatgg
aaaccaaagggtggcactcttgttgtctgtcctgagtcctttctgagccagtggaaggat
gagcttgaaactcattcagagtcacaagggatttcctttcttgtgttcgttaggggaaga
gataataacaataaaatgatctctgaaaaagatgtggtgttgactgaatatgatatcttg
gctgatgcttatgcaaaggataaggagaacagcattttccaccaggttgattggtatagg
gtggtgcttgatgaagctcacaatatcgagtcttcttgtccccaatatgctgaggctgct
tctaccttgtcgtcacattgccgatggtgtttgacaggaactccccttcagattaatctt
gacgacatctacagcctcttgtgcttgttgaatgttgaaccatggtgcgactggatgtgg
tggaacaaattaattcaaatgccttatgagagcggtgatccaagaggacaacgattgttg
aaggctatattgagcccattgatgctaagaagaacgaaggagacgaaggataaagatgga
aggccaatactggttctccctcctgacattcacaacatccagtgtgatcagttagaagct
gaacatgaattttatgaagccctttttcacagatcaaaagtccagtttgaacagattgtg
gcgcaaggcaaggttcttcacaactattccagtgtccttgaactactacttaaattgagg
cagtgttgcagccacccttgtcttgttatgaggggtgattcacataagtttgcagactca
gacaagcttgctagaagatccctcgaaagtaatcatgattctctaattgcaaatcagatt
atctccacccaagcatgtattgaagaggttgtcaagggtatctgtgggggaaaaagcata
aagtgtcccatatgcttggattttgcagatgatcctgtacgtacaccatgtgcacatcag
atgtgcagggagtgtctcctctcaagttggccgagaccaagttttggtcaatgccaagta
tgttttaattggattgggaaaactgacctcataacttgcaaatcagaaaaccattgccag
tcagatattaaggaaattttgaaggagtcttccaaggtttcaaagctcttggagtgcttg
aaacatattgttgattcaggttctaatgaaaagagcattgttttcagccagtgggcttca
tttttggatctcttggagacctctatgaagagaagaggaattggctgtgtaaggtttgat
ggaaagctcccggacatgcatagggacagggcattggctgagttcagtaagaccacggac
aaaatggtattgttgatgtctctgaaaactggtggtgatagtctagatctaactgcagca
tctaatgtctttctaatggatccaccctggaatccagatgttgaggaggaagcaataatg
agaattcttcgtaatagacggaagcgaactgcttttataagatttattgtcaaggacacg
gtggaggaacgactgcagcaagttcaggcgaggaagcagcggatgattgccggagctctc
actgataacgaagttcaatctgccaggattgaggaactcaaaattctttttgcatga

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