Rosa chinensis (China rose): 112200483
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Entry
112200483 CDS
T06020
Name
(RefSeq) protein argonaute 4A
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112200483
03036 Chromosome and associated proteins [BR:
rcn03036
]
112200483
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112200483
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112200483
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112200483
microRNA pathway
RISC loading complex
112200483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAZ
ArgoN
ArgoL1
Piwi
Mito_carr
Motif
Other DBs
NCBI-GeneID:
112200483
NCBI-ProteinID:
XP_024197291
LinkDB
All DBs
Position
1:complement(10427374..10430028)
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AA seq
465 aa
AA seq
DB search
MPLRSSSAAIAPMLRVPRSTTSPVTTRTTFINGRASSMLATCVIQPIDIIKIAMQYDEGT
EVDRKGIGRKVPEKVNDTYSVELENKDFAYDGEKSLFTVGQLPHKKLDFTVVLDDISSSR
SRTNGGSGGSYSLEESQGNRKRVKQSFQSKTIKVQVNFAAKILMQAITNALRGQDSDHFK
EAVRVLDIIIRQNAAKQGCLLVRQSFFHNNPRNFIELGGGVLGYRGFHSSFWATQGGLSL
NMDVSTIMIVKPGPVLNFLMENQNVKTPYQIDWIKAKRMLKNLKVETYASKTEYKITGLS
DKPCKQQTFFLKSKGGHDGDGEEITVYEYFAQHQHMQLRDSADFPCINVGKPKKPSYFPL
ELCNLVSLQRYTKALSNLQRASLVEKSRQKPQEQMSTLRDLGGINSLLMVEHPPSLPLVS
KSPTLILGMDVSHGSLGRSDVPSIAVVVSSRKWPLISRYRAAIRT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgccattgaggagctccagcgctgccatcgcaccgatgttgcgtgtgcctcgcagcacc
accagcccagtgaccacgcgaacgacattcatcaatggtagagcctccagtatgctcgct
acctgcgtcattcaacccatcgatatcatcaagattgccatgcaatatgatgaaggaacc
gaagttgacaggaaaggcattggacgtaaggttcctgaaaaagtaaacgacacatatagt
gtggagctggaaaacaaggattttgcttatgatggagagaagagcttatttactgttggg
cagctccctcataaaaaacttgatttcacagtagtactggatgacatatcatcaagtagg
tctaggacgaatgggggatctgggggcagttactccctagaagagagtcagggcaatagg
aagagagtcaagcagtcatttcaatccaaaacaataaaggtacaggtcaactttgctgct
aaaatcctaatgcaagcaatcacgaatgccttgcgaggtcaggactctgaccattttaag
gaagcagttagagttcttgacatcattataaggcagaatgcagcaaagcagggttgtctc
cttgttcggcaatctttcttccataacaacccgaggaacttcatagaattgggaggaggg
gtgttaggctacaggggttttcattcaagcttctgggccacgcaaggcggcctatccctg
aatatggatgtgtccactataatgattgtaaaacctggtcctgttttgaatttcctcatg
gagaaccagaatgtcaaaactccttaccagattgattggattaaggctaagaggatgcta
aaaaatctaaaggttgagacctatgcttccaagacggagtacaaaatcactggattaagc
gataaaccctgcaaacagcagacgttctttttgaaatcaaaaggaggacacgatggagat
ggagaagagatcactgtttatgaatactttgcccagcatcagcacatgcagttacgcgat
tcagcagattttccctgcatcaatgttggaaaaccaaagaaaccttcttactttccccta
gagctttgtaatttggtttccttgcaacgctataccaaggctttatccaatctccaaagg
gcttcactagtggagaagtctcggcaaaaaccccaggagcaaatgtcaactttgcgtgat
cttggcggaatcaactccttgctaatggtggagcatcctccttctctacccttggtatcc
aagtcccctactctgattttagggatggatgtgtcacatggctcacttgggcgttccgat
gtgccttctattgcagtggtggtcagttccaggaaatggcctttgatttctcgttaccga
gctgcaattcgtacttaa
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