Rosa chinensis (China rose): 112200526
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Entry
112200526 CDS
T06020
Name
(RefSeq) LEC14B homolog isoform X2
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112200526
Ubiquitin system [BR:
rcn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112200526
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_EIPR1
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_SPT8
WDR54
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
112200526
NCBI-ProteinID:
XP_024197331
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All DBs
Position
4:complement(46236709..46242554)
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AA seq
473 aa
AA seq
DB search
MSYRRRFGKDNSACDSGNAVEGSASSEEANEASKSLDHEVAHLTKLRSRPHQHLRGVLPG
KLRFPVSTLKMLMGREGNYSGRGRFSSADACHVLSRYLPINGPWGVDQLNSPAYVSQFSN
DGLFFVAGFQGGHIRIYNVEKGWTVQKDILTKSLRWTITDTSLSPDQRFLAYASMSPIVH
IVNAGSSTTESLANITEIHEALDFSVDYDEEFGIFSVKFSTDGRELVAGSSDASIHVYDL
QANKVSLKIPAHTSDVNTVCFADETGHLIFSGSDDNLCKVWDRRCFITKGQAAGVLMGHL
QGITFIDSRGDGRYLISNGKDQTTKLWDIRKMSSRNMYPRITDCDWDYRWMEYPAHARTS
RHPLDQSLATYRDHSVLRTLIRCYFSPAYSTGQKYIYTGSSDHSVYIYDLVTGAQVAKLF
HHDGPVRDCSWHPTYPMLVSSSWDGSIVRWEFPGDDQVPTLVKPRVRRRRAFY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagttacagaaggaggtttgggaaagataatagtgcctgtgatagtgggaatgctgtt
gaaggttctgcttcaagtgaagaagccaatgaagcatcaaagagccttgatcatgaagtg
gctcacctcactaagcttagatcaagaccccatcagcatttgaggggggtcttgcccgga
aagttgaggtttccggtgtcaacactgaaaatgttgatgggccgtgaaggtaattattcg
gggcgagggaggttttcgtcagcagatgcttgtcatgttttaagccggtatctgcccatt
aatggtccatggggggtggaccagttgaatagccctgcatatgtttctcagttctcaaat
gatggcttgttttttgttgctggatttcagggaggtcatattagaatatataatgttgaa
aagggatggacagttcagaaggacattctaaccaaaagcttgagatggacaattaccgat
acatctctatcaccagatcaacgatttcttgcatatgctagcatgtcacctattgtccat
attgtcaatgctggatcttctacaacagagtcacttgcaaacattacggaaatacatgaa
gctctggatttttctgttgattatgatgaagaatttggaatattctctgttaaattttca
actgatgggcgagagcttgtggctggaagtagtgatgcttcaatacatgtttatgatctc
caagcaaacaaagttagcctcaaaataccagcgcatacgtcagatgtaaacacagtgtgt
tttgcagatgagactggccatctcatattttccggcagtgatgataacctctgtaaggtg
tgggatagacgctgctttatcacgaaagggcaagcagctggggttctcatgggacatctt
caaggcataacgtttattgatagtcggggagatggacgttacttaatatcaaatgggaag
gatcagactaccaaactttgggatatacggaagatgtcttctagaaatatgtatccaagg
attacagattgtgactgggattacaggtggatggagtacccagctcatgcaagaacttcg
agacatcccttggatcagtcgttggctacatatagagaccattcagtcctgcgcacttta
attcgctgttacttttctccagcatatagcactggacaaaagtacatctacactggatct
agtgatcattcggtctatatttatgatctggtgactggagctcaagttgcgaaactcttc
catcatgatggacctgtaagagattgtagttggcatcctacatatcccatgttggtcagt
tcttcctgggatgggagtatcgtgagatgggagtttccgggagatgatcaagttcctacc
ctggtcaagccaagagtaaggcggaggagagctttctactga
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