KEGG   Rosa chinensis (China rose): 112200526
Entry
112200526         CDS       T06020                                 
Name
(RefSeq) LEC14B homolog isoform X2
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rcn04121]
    112200526
Ubiquitin system [BR:rcn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     112200526
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_EIPR1 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_SPT8 WDR54 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 112200526
NCBI-ProteinID: XP_024197331
LinkDB
Position
4:complement(46236709..46242554)
AA seq 473 aa
MSYRRRFGKDNSACDSGNAVEGSASSEEANEASKSLDHEVAHLTKLRSRPHQHLRGVLPG
KLRFPVSTLKMLMGREGNYSGRGRFSSADACHVLSRYLPINGPWGVDQLNSPAYVSQFSN
DGLFFVAGFQGGHIRIYNVEKGWTVQKDILTKSLRWTITDTSLSPDQRFLAYASMSPIVH
IVNAGSSTTESLANITEIHEALDFSVDYDEEFGIFSVKFSTDGRELVAGSSDASIHVYDL
QANKVSLKIPAHTSDVNTVCFADETGHLIFSGSDDNLCKVWDRRCFITKGQAAGVLMGHL
QGITFIDSRGDGRYLISNGKDQTTKLWDIRKMSSRNMYPRITDCDWDYRWMEYPAHARTS
RHPLDQSLATYRDHSVLRTLIRCYFSPAYSTGQKYIYTGSSDHSVYIYDLVTGAQVAKLF
HHDGPVRDCSWHPTYPMLVSSSWDGSIVRWEFPGDDQVPTLVKPRVRRRRAFY
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgagttacagaaggaggtttgggaaagataatagtgcctgtgatagtgggaatgctgtt
gaaggttctgcttcaagtgaagaagccaatgaagcatcaaagagccttgatcatgaagtg
gctcacctcactaagcttagatcaagaccccatcagcatttgaggggggtcttgcccgga
aagttgaggtttccggtgtcaacactgaaaatgttgatgggccgtgaaggtaattattcg
gggcgagggaggttttcgtcagcagatgcttgtcatgttttaagccggtatctgcccatt
aatggtccatggggggtggaccagttgaatagccctgcatatgtttctcagttctcaaat
gatggcttgttttttgttgctggatttcagggaggtcatattagaatatataatgttgaa
aagggatggacagttcagaaggacattctaaccaaaagcttgagatggacaattaccgat
acatctctatcaccagatcaacgatttcttgcatatgctagcatgtcacctattgtccat
attgtcaatgctggatcttctacaacagagtcacttgcaaacattacggaaatacatgaa
gctctggatttttctgttgattatgatgaagaatttggaatattctctgttaaattttca
actgatgggcgagagcttgtggctggaagtagtgatgcttcaatacatgtttatgatctc
caagcaaacaaagttagcctcaaaataccagcgcatacgtcagatgtaaacacagtgtgt
tttgcagatgagactggccatctcatattttccggcagtgatgataacctctgtaaggtg
tgggatagacgctgctttatcacgaaagggcaagcagctggggttctcatgggacatctt
caaggcataacgtttattgatagtcggggagatggacgttacttaatatcaaatgggaag
gatcagactaccaaactttgggatatacggaagatgtcttctagaaatatgtatccaagg
attacagattgtgactgggattacaggtggatggagtacccagctcatgcaagaacttcg
agacatcccttggatcagtcgttggctacatatagagaccattcagtcctgcgcacttta
attcgctgttacttttctccagcatatagcactggacaaaagtacatctacactggatct
agtgatcattcggtctatatttatgatctggtgactggagctcaagttgcgaaactcttc
catcatgatggacctgtaagagattgtagttggcatcctacatatcccatgttggtcagt
tcttcctgggatgggagtatcgtgagatgggagtttccgggagatgatcaagttcctacc
ctggtcaagccaagagtaaggcggaggagagctttctactga

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