KEGG   Rosa chinensis (China rose): 112200632
Entry
112200632         CDS       T06020                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03010  Ribosome
rcn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    112200632
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112200632
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:rcn03011]
    112200632
   04121 Ubiquitin system [BR:rcn04121]
    112200632
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rcn04147]
    112200632
Ribosome [BR:rcn03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    112200632
  Archaea
    112200632
Ubiquitin system [BR:rcn04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   112200632
Exosome [BR:rcn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112200632
  Exosomal proteins of colorectal cancer cells
   112200632
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N Thioredox_PDIA6_C DUF2604 UBL_UBAC1 TBK1_ULD OTU1_UBXL Fer2_3 Ubiquitin_5
Other DBs
NCBI-GeneID: 112200632
NCBI-ProteinID: XP_024197422
LinkDB
Position
4:63672795..63673530
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGKVQKLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacgggcaagaccatcactctcgaggtcgagtcctcc
gacaccatcgacaatgtcaaggccaagatccaggacaaggagggcatcccgccggaccag
cagcgcctgatcttcgccggaaagcagctcgaggacggccgcactctcgccgactacaac
atccagaaggagtccactctccacctggtgctccgtctccgcggtggcgccaagaagagg
aagaagaagacctacaccaagcccaagaagatcaagcacaagcataagaaggtcaagctc
gccgtgctccagttctacaaggttgatgactccggcaaggtgcagaagctgaggaaggag
tgccctaacgccgagtgcggcgccgggaccttcatggccaaccacttcgacaggcactac
tgcggcaagtgtggattgacctatgtctaccagaaggccggcggtgattag

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