Rosa chinensis (China rose): 112200816
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Entry
112200816 CDS
T06020
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcn03009
]
112200816
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112200816
Ribosome biogenesis [BR:
rcn03009
]
Eukaryotic type
90S particles
Helicases
112200816
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
112200816
NCBI-ProteinID:
XP_024197594
LinkDB
All DBs
Position
4:66294035..66298581
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AA seq
744 aa
AA seq
DB search
MRKPISKTTRKQKLLSEVEEINLLNSWIESQKPDCGSNPMSLPPLPSKAPIGRVDPTSFS
RYAGATRFADLPISKKTKDALRQSKYTDMTDIQRACLPHALCGRDILGAAKTGSGKTLAF
VIPLLEKLYKERWNPEDGVGSIIISPTRELASQTFDVLRAVGKHHNFSAGLLIGGRKDVE
AEKERVNELNILVCTPGRLLQHMDETPNFECSQLQVLVLDEADRILDVGFKKALNAIISQ
LPKRRQTFLFSATQTKSVQDLARLSLKDPEYLSVHEKATRATPNRLKQTAMIVPLDKKLD
MLWSFIKAHLNSRILVFLSTRKQVKFVYEAFKKLRPGIPLKCLHGKMKQEGRMGTYSQFH
EKATVLFSTDVASRGLDFNQAVDWVVQVDCPEDVASYIHRVGRTARYQSEGRSLLFVMPS
ETKMLEKLDAAKIPIESIKANNKRLQPVSGLLSALLVKYPDTLPGLAKRAFITYLKSIQN
HKDKEVFDVMQLPVDEFSASMGLPMTPKIRFSNHKMKSKKPLELSPIVEPESSDMENALE
TPREELDIGDSEAEEVERGLLQINDAPTEREEEGRQIADIMPATRVLKKKKLKINLDRPL
GTRKVYDEDGNLVDPLARLAGPSDPSVLDGLQDKKEEFHKRLREEVKMVDKEDKVKDRQR
RREKRMKEKMKLKRADAEEEEDDDSESEEEPSDNRSHKKSKIYFDSDDNGEREEKKDKAG
FIADPSYIEHQQALALKLLDSMHK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaacccatatcaaaaacaacgcggaagcaaaagctactctcggaggtcgaagaa
atcaacctcctcaattcatggatcgaatcccagaaacccgactgcggctccaaccccatg
tctctcccgcctcttccctccaaggcccccattgggcgcgtggaccccacctccttctcc
cgctacgctggcgccaccaggttcgccgacctccccatctccaagaagaccaaggacgcc
ttgcgccagtccaagtacaccgacatgaccgatatccagagggcgtgtttgccccacgcg
ctctgcggcagggatattctcggcgctgccaagaccggctccggcaagactctggctttt
gtgattccgcttctggaaaaattgtataaagagagatggaatcctgaggatggggtaggc
agcattattatatctccgacaagggaattagctagtcaaacgtttgatgtgttaagagca
gttgggaagcaccataattttagtgctggcctcctaattggtggtcgaaaagatgttgaa
gcggagaaggagcgtgtaaatgaactgaacatactggtttgcactcctggacgacttcta
caacacatggatgagacaccaaattttgagtgttcacagctacaggttttggtcctcgat
gaggcagatcgtattcttgatgtgggatttaagaaggcactgaacgccatcatttcacag
ctacctaagagaagacaaacctttctcttctctgcaactcaaacaaagtcggttcaagat
cttgcaagacttagtttgaaggacccagagtaccttagcgtgcatgagaaagctacaaga
gccactcctaatcgtttgaagcaaactgcaatgattgttcctcttgataaaaaactagat
atgctgtggagcttcattaaggcgcatctgaattctaggattttagtgttcttatcgaca
cgtaaacaggtaaagtttgtctatgaagcatttaagaagctccgacctggaatacccctg
aagtgtcttcatggtaagatgaagcaagagggaagaatgggaacatattcgcagtttcat
gaaaaagctacggtccttttctcgactgatgtagcttcgagaggccttgatttcaaccag
gcagtcgactgggttgttcaggtggattgtccagaagatgttgcatcctatatacacaga
gttggccgaactgcgcgctatcaatcagaagggcgatcacttttatttgtgatgccctca
gaaacaaaaatgcttgagaaattagatgccgcaaaaatacccatagaaagcatcaaggct
aacaacaagagactgcaacctgtcagtggtttgctatcagctttgctagtcaagtaccca
gacacacttccaggtctggccaaaagggcctttatcacgtacttgaagtctattcaaaat
cacaaggacaaagaagtttttgacgtaatgcaactgccagttgatgagttttcagcatca
atgggtttaccaatgacccccaagatccgtttttcaaaccacaaaatgaagtccaagaaa
ccattggaactgtctcccattgttgaaccagaaagttccgacatggagaatgcattagag
actcccagagaggagcttgatattggtgattcggaggcagaggaagtggagagaggtctt
cttcaaataaatgatgcaccaactgagagagaggaggaaggaagacagattgcagatatt
atgccggcaactcgggttctgaagaaaaagaagttgaagatcaatctcgatagaccattg
ggaactaggaaggtctatgatgaggacggcaatttggtggacccacttgcaaggctggct
ggtcccagtgatcctagcgttcttgatggacttcaagacaagaaagaagaatttcataag
aggcttagggaagaggtgaagatggtagacaaggaagataaggtaaaagatcgccagcgt
cgccgtgaaaaacgaatgaaggagaagatgaagttgaagagagcagatgcagaagaagag
gaggatgacgattctgagtcggaagaagagccatctgataatcgatcgcacaaaaagtca
aagatttactttgatagtgatgataatggtgagagagaagaaaagaaggataaagctggg
ttcattgctgacccaagttatatagagcatcagcaagctttggctctcaaactgttagat
tctatgcacaagtag
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