Rosa chinensis (China rose): 112200984
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Entry
112200984 CDS
T06020
Name
(RefSeq) uncharacterized protein LOC112200984 isoform X1
KO
K18469
TBC1 domain family member 5
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112200984
Membrane trafficking [BR:
rcn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112200984
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
112200984
NCBI-ProteinID:
XP_024197757
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All DBs
Position
4:complement(17002570..17007908)
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AA seq
829 aa
AA seq
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MAPGPMESALPESSSSSSSGANSVVERSVAEDLRFKELRGVQWRLNLGILPLSSSIDDLR
RVTADCRRRYARMRRRLLVDPPKDGSSSPDLAMDNPLSQNPESTWGRFFRNAELEKMVDQ
DLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHPECGYRQGMHELLAPLLYVLHVDVEGL
SQVRKLYEDHFTDKFDDLSYHENDSTYNFDLKNLPDSMEDEDSLQGDASKVKSLDELDPK
IQTIVMLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMSGVNGSVSMAEFFSPSPAVGSQ
TSLPPVIEASAALYHLLSLVDSSLHSHLVELGVEPQYFALRWLRVLFGREFSLANLLIIW
DEIFLSDNRKLDKGGEDDAGSGFSILSSPRGAFISALAVSMLLHLRSSLLATENATACLQ
RLLNFPENIDLKKLIQKATSLQALALENNSSSSFPSYMGPYEHSKSKAVRGHSLSIDSVS
PKTPLSLVNESYWEEKWRVLHREEELRQDILKQQVPSQKKRWTEKVKLSLSRSESAPSPA
KCENGKKTPRFAVRRKLLEDLSRVLSSEEDIEKLGTHKDKCSSEVVVNKEDGVSKDLTSA
NEDRCLNGSPASEENSFVGSYPASPLSGADEPELEKSSVGSNLSIDENDDNPNDDNPQCV
SEGPPCPVSDPAEGVSQASECSNHSTGNSVTGKERKLLSGKFQRFWKLGWSAAGEGTSEK
GGNALDATKSIRSDVGQNAASSSMAEGSNSVVSCKGETVDQNRTGTLRNLGHSMLDHIQV
IESAFQQDRGVQVGSVENCSTNTLVGKGQVTAIAALKELRKISNLLSEM
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaggtcctatggagtcggcattgccggaatcatcatcgtcgtcgtcttccggc
gctaactctgttgttgagagatctgtggctgaggatcttcgtttcaaggagctgagaggt
gtgcaatggcgcttaaatcttgggattttgcctctttcttcttccattgatgatcttcgc
cgcgtcacagcggattgtcgacgaagatatgctagaatgagaagacgccttctagttgat
ccacctaaggatgggagtagttctcctgatcttgccatggacaatcctctgtcccagaac
ccagaaagcacctggggtcgcttctttcggaatgctgagctggagaaaatggttgaccag
gatttatcacgtttatacccagaacatggaagctacttccaaacaccaggatgtcaaggc
atgctgagaagaatcttgttattgtggtgtctcagacatccagagtgtggttacagacaa
ggaatgcacgaactcttggctcctcttctatatgttcttcatgttgacgtggagggtcta
tctcaagtgcgaaagctatatgaagatcacttcactgataaatttgatgatctatcttat
catgaaaatgattcgacttacaattttgatttaaaaaaccttcctgattccatggaagat
gaggatagtttgcagggagatgcatcaaaagttaagagtctggatgagcttgatcccaag
atacagaccattgtaatgctcagtgatgcttatggtgctgaaggtgaattgggtattgtc
ttatctgagaaatttatggaacacgatgcatactgcatgtttgatgcgttaatgagtggg
gtcaatggttcagtttctatggcagaattcttctctccctcccctgctgttggctctcag
actagcttacctcctgtcattgaagcatctgctgcattgtatcatttgctgtctctcgtt
gattcatctctacacagccaccttgttgagcttggtgttgaaccccagtattttgcactc
cgctggttaagggttttatttggacgtgaattttcacttgcaaatctattgataatttgg
gatgagatatttctgtctgataatcgtaaattagacaaaggtggtgaagatgatgcagga
tccggctttagcatccttagttcacctcgaggagcatttatttcagccctggcagtttcc
atgttacttcatttgagatcttcccttcttgccacagagaatgcaactgcatgtcttcaa
cggttactaaactttcctgagaatattgatttaaagaaactgatacagaaggcaacgtca
ttgcaggctcttgctttggagaacaatagctcatcctcatttccttcatatatggggcca
tatgagcatagtaaatcaaaggctgtgagaggtcatagtctttcaatcgactccgtttct
ccaaaaactccattaagtttggtaaatgaaagctactgggaagagaagtggagagttctg
cacagggaagaagaacttaggcaagatattttgaaacaacaggttcccagccagaagaag
cgatggactgaaaaagtaaaattgagcctatctagatcagaatctgccccatctccagca
aaatgtgagaatggcaaaaagacccctaggtttgctgttagacgaaagttgctggaagac
ctctcgagagtgctcagctcagaggaagatattgagaaattaggcactcacaaagacaaa
tgctcttcagaagttgtggttaacaaagaagatggtgtcagtaaggatcttacttctgca
aatgaagacagatgtttgaatggaagtccagctagtgaagagaactcatttgttggctca
tatccagcaagtcctctgagtggggctgatgaacctgaattagagaaaagtagtgttgga
tcaaacttatccattgatgaaaatgatgataatccaaatgatgataatccacagtgtgta
tcagaaggcccaccttgtccggtttctgatccagctgagggtgtctctcaagcatccgag
tgcagcaatcattcaacggggaattcagtgacaggaaaggaacgaaagcttctttctggt
aaattccagaggttttggaagttgggatggagtgcagctggtgaaggcacgtccgagaaa
gggggcaacgcccttgacgctacaaaatctatcaggagtgatgttggtcagaatgcagca
agctcttctatggctgaagggtccaattctgtagttagctgcaaaggggaaactgtggac
cagaataggacgggtactttgaggaatcttgggcattctatgcttgatcatatacaggta
atcgagtctgctttccagcaagatcgaggtgttcaagtgggatcagtcgagaactgttca
acaaatactttagttggcaaaggacaagtaacggccattgcagctctcaaggagcttcgg
aagatcagcaatcttttgtcagaaatgtga
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