Rosa chinensis (China rose): 112201184
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Entry
112201184 CDS
T06020
Name
(RefSeq) flap endonuclease GEN-like 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112201184
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112201184
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
XPG_I_2
Chromo_2
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
112201184
NCBI-ProteinID:
XP_024197978
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Position
1:45360756..45377183
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AA seq
650 aa
AA seq
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MGVGGKFWDLLKPYARHEGFDFLRNKRVAVDLSLWIVQHETAIKARARSPHLRLTFFRTI
NLFAKFGAFPVFVVDGSPSHLKSQARTARFFRSSGIDSSSLPVAEDGISAERNSRFSKYV
QECVELLELLGIPVLKAKGEAEALCGQLNLEGDVDACITSDSDALLFGAKCVIKSFQSNS
KEPFECYYMSDIEAGLGLKRKHMIAISLLVGNDHDLNGVPGIGLDTALRFVQTFSEDEIL
NRLRDIGNGDASLFQGGIQYVDDIVPSSAESSLKAKLSHCSFCGHPGSKKAHSKSSCEYC
ITNMDEGCLKKPEGFRCSCSSCDMDRKEKEQKKQENWRLKVLNKIALEQNFPNEEIIEMY
LCNNHGYFSGRWERVRLSHSQWLIGFRLHLCLCEYILPIEVSNHVLNFRTANEGPCISWE
SPKTELLVDFLAFHRLWEPSYIRQRMLPMLSTIYLREMAATPVNNLLYGQYEFDSIDRLK
IRNGHQFYVVKWKKAAPTMNSVTFTNPEEESDILQDDVIEVDESISVWDESDVPEIRNSD
GCYFLLTDENMDLVQAAFPEEVDRFLQEKELKELKRRKASVMPETPPKPKGVQLNITEFY
RSTKAKKLETEAGEDLTQISVNQNAETSKEKRKPSSSNLPKSVRRRLLFD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgggtggtaaattctgggacttgcttaaaccctatgctcgccacgagggtttt
gatttcttgaggaacaagcgcgtggctgtggacctctccctttggattgtgcagcatgaa
actgctatcaaggcgcgtgcacgaagcccccacctgaggctcacattcttccgcaccata
aatctcttcgccaagtttggagcatttccagtctttgtggttgatggaagcccatcacat
ctaaagtcacaggcgaggactgcaagattctttcggtcttctggtattgattcatctagt
ttgcctgtggctgaagatggcatttcagctgagaggaacagcagattttccaagtatgtt
caagaatgtgtggaactacttgaactacttgggatacctgttttaaaggcaaaaggagag
gctgaagcactgtgcggtcagttaaatctcgaaggtgatgtagatgcttgcatcacatct
gatagtgatgccttactctttggggctaaatgtgtgataaaaagcttccaatccaattca
aaggaaccatttgaatgttactacatgtcagatattgaagctggtctaggtttgaaaagg
aaacatatgattgcgatctctcttttggttggaaatgaccatgatttgaatggagtgcca
ggtattggactagatacagctcttcgctttgtccagacttttagtgaagatgagatactg
aatagattacgtgatataggcaatggcgatgcttcactgtttcaaggtggtatccaatat
gtggatgatatcgtaccgagttcagctgagagctcgttaaaggcaaaactttctcattgt
tcattctgtgggcatcctggcagcaaaaaagctcattccaagtcttcctgtgaatattgt
attaccaacatggatgagggttgcttgaaaaagccagaggggttcagatgcagttgctct
tcctgtgatatggatcgtaaagaaaaggaacagaagaagcaagagaattggcgactgaaa
gttctcaacaaaattgcactggagcagaattttcccaatgaagagataattgaaatgtat
ttgtgcaacaaccatggttacttcagtgggagatgggaaagggttaggctatcccattcc
caatggctgatcggttttcgattgcatttgtgtctatgtgaatacatcttgccaatcgag
gtgtctaatcatgtgctcaattttcgcacagcaaatgagggcccttgcatatcctgggaa
agtccaaaaactgaattgctggttgatttcttagcttttcatcggctatgggaaccatct
tatattcgccagaggatgcttcctatgctgtctaccatttatttgagggaaatggcagca
actcctgtaaacaatttgttgtatgggcaatatgagtttgattccattgaccgtttgaaa
ataagaaatggtcatcaattttatgtggtcaagtggaaaaaggctgcacctacaatgaat
tctgtcactttcacaaatcctgaagaggagtcagatatcctacaagacgatgttattgaa
gttgatgaatccattagtgtatgggatgagtctgatgtccctgagattcgtaacagtgat
gggtgctactttttgctaacagatgaaaatatggaccttgtccaggctgcgtttccagag
gaagttgacagatttttgcaagagaaggagctgaaagaactgaaaagaagaaaagccagt
gtaatgcctgaaacaccgccaaaaccaaaaggtgtgcagctaaatattactgaattctac
cgctctaccaaagcaaagaaactggagacagaagctggagaagatctaacccagatcagt
gtcaatcagaatgctgaaactagtaaagaaaagagaaaaccatctagttcaaatcttccc
aagtctgtaagacgccgtcttttgtttgactga
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