Rosa chinensis (China rose): 112201578
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Entry
112201578 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112201578
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112201578
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112201578
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Spore_III_AF
PWD_link
Death
Motif
Other DBs
NCBI-GeneID:
112201578
NCBI-ProteinID:
XP_024198254
LinkDB
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Position
5:complement(11967293..11971331)
Genome browser
AA seq
614 aa
AA seq
DB search
MSNNQVPSDVPMMSITRGIKYNFDNVEEQPRDPPWSDRDAASTKQKLEETVLSVSFWNKM
FVLACVIAVSLDPLFFYIPMIDEEEKCLAVDKELRTITLILRSLTDVTFVVNIIYHVCKA
INAAYKVHKGKKSELASDWEFSKVSTAEIIPFAKLVAGKLAWRSTLTSILAVFPMPQLLL
VFVFFKMRGHGYLERRKILNVFLLAQYLPRIYRIYLSSQKLRQTTGIWAKALFNFFLYIL
ASHVLGAFWYFFSIQRETSCWHRACVNNSTDVEGCMSTLYCEVHNIAARNATFLDQFCPI
SAEENAKAPFDFGIFLDSLKNGITGDIHFGTKLSYSFWWGLRNLSNFGTNLETSTYVWET
CFAIFISVIGLLLFLYLIGNVQTFMSMETQRWEDIRNKIQLKEKDIAEWMDRNELPDDMK
KEIMKNIKQKLEENKDADLENLFSVLPIYTKKCLKRFLCMKTLKKVPKLERMDEIVLKMM
CDYLKPVMYAEGTVVLQMGDPLHSMLLITEGTLLTYRTTSNDSHVATENAKMGSIPSSPS
VGNLDKGDFYGAEELIEWVTQKKDLGQLPGSAFNVKCDSKVEGFVLAAKDLRSVVSKCEN
WWKIGISQSDHSKC
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacaaccaggtacccagtgatgtccctatgatgagcatcacacggggaatcaag
tacaatttcgacaatgttgaggagcaaccgcgagatcccccgtggagtgatcgagatgca
gcttcaacaaaacaaaaattggaagaaacagttctttcagtttcattctggaataagatg
ttcgtacttgcatgtgtgattgcagtctcattagacccgttgttcttctacattccaatg
atcgatgaagaagaaaagtgccttgcagtagacaaagagttgaggactataactctcatt
ttgcgatcgcttactgatgtcactttcgtagtgaatatcatatatcatgtttgcaaagcc
attaacgccgcctacaaagtacacaaaggaaaaaagtctgaattggcatctgattgggaa
ttttcgaaggtatcaacagcggagataattccatttgctaaattagttgctgggaagcta
gcatggcgctctacgctaaccagcattttagctgttttccccatgccacaactgcttcta
gtatttgtcttcttcaaaatgagaggccatggatacttggagcgtagaaagattctgaat
gtctttcttctcgctcaatatctgccaaggatctatcgaatttacctatcatctcagaaa
cttagacaaactactggaatatgggctaaagctctgtttaatttttttctatatatactt
gcaagtcatgtccttggagctttttggtactttttttctattcaacgagaaacttcttgt
tggcatcgggcatgtgtaaataatagtacagatgttgaaggatgtatgagtaccttatac
tgtgaggttcacaatattgctgcaagaaatgccacattccttgatcaattttgccctata
agtgctgaagagaatgctaaggccccttttgattttggaatatttttggattccctaaaa
aatggtatcacaggggatatacacttcggaacgaagttatcttactctttttggtgggga
ttgcgtaatctaagtaattttggcacgaatctcgaaacaagcacctatgtgtgggaaact
tgctttgcaatttttatttctgtcattggcttgctactatttctatatctcattggaaat
gtgcagacatttatgtccatggaaactcaaagatgggaggacataagaaacaagatacaa
ttgaaagagaaagatatagcagaatggatggatagaaatgagctcccagacgatatgaag
aaagaaattatgaagaacataaagcaaaaactggaagagaataaagatgctgatcttgag
aatcttttctctgttcttccgatatataccaaaaagtgtctaaagcgtttcctctgcatg
aaaacgctaaagaaagtcccaaagcttgagaggatggatgaaatagtgttgaaaatgatg
tgtgactatctaaagccagtgatgtatgccgagggcaccgtggttttacaaatgggagat
ccactacatagcatgctactcattacagaaggcacattattgacctacagaactaccagt
aatgatagtcatgttgcaactgaaaacgcaaaaatgggtagtattccaagttctccgtca
gtgggcaaccttgacaaaggtgacttttatggcgccgaagaactgatcgagtgggtaaca
caaaagaaggatttaggccagcttcccggctctgccttcaatgtgaaatgcgattcaaaa
gtagaaggctttgttctcgcggccaaggacttgagaagtgtagtttccaaatgcgaaaac
tggtggaaaattggcattagccagtcagaccacagcaaatgctag
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