Rosa chinensis (China rose): 112201764
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Entry
112201764 CDS
T06020
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112201764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112201764
03110 Chaperones and folding catalysts [BR:
rcn03110
]
112201764
03029 Mitochondrial biogenesis [BR:
rcn03029
]
112201764
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcn04147
]
112201764
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
112201764
Messenger RNA biogenesis [BR:
rcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
112201764
Chaperones and folding catalysts [BR:
rcn03110
]
Heat shock proteins
HSP60 / Chaperonin
112201764
Mitochondrial biogenesis [BR:
rcn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
112201764
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112201764
Exosomal proteins of other body fluids (saliva and urine)
112201764
Exosomal proteins of breast cancer cells
112201764
Exosomal proteins of colorectal cancer cells
112201764
Exosomal proteins of bladder cancer cells
112201764
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Ead_Ea22
Motif
Other DBs
NCBI-GeneID:
112201764
NCBI-ProteinID:
XP_024198453
LinkDB
All DBs
Position
5:complement(62271764..62275029)
Genome browser
AA seq
585 aa
AA seq
DB search
MASANALTSASILCSPRQSLSRRVNQQQINRLNYKQSRGRFAVKAAAKDIAFDQQSRRAM
QAGIDKLADAVGLTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELPDAMENAGAALIREV
ASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVQALVDELENKSRP
VKGRDDVKAVASISAGNDEQIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDR
GYISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRSPLLIIAEDVSGE
ALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQANDLGLLIENTTVEQL
GLARKVTISKDSTTIIADQASKDELQSRIAQLKKELSETDSVYDTEKLAERIAKLSGGVA
VIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTYVPAIKDRLEDAD
EKLGADIVQKALVAPAALIAQNAGIEGEVVVEKLKESEWEVGYNAMTDTYENLVDAGVID
PAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKSPAAAAAQGLTV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgccaacgctctcacctctgcttccattctctgctcgcccagacagagcttg
agtaggagggtaaatcagcagcaaatcaacaggctgaattacaagcagtcgagggggcgg
tttgctgtgaaagccgctgcgaaagacatagccttcgaccagcagtcgaggcgtgctatg
caagccggcattgataagcttgctgatgctgttggccttactcttggtcccagagggagg
aatgttgtgttggatgagtacggtagccctaaagtggtgaatgatggagtgacaattgct
agagctattgagctacctgatgctatggaaaatgctggtgcagctctcattagggaggtt
gctagtaagaccaatgattctgctggtgacggcacaacaacagcatccattcttgcacgt
gagataatcaagcttgggcttttgagtgtcacctctggtgcaaatccggtttcaattaag
aaggggattgataaaactgtacaggcattggtggacgaactagagaacaagtctaggcct
gttaagggtcgtgatgatgttaaagctgttgcatctatttctgctgggaatgatgagcaa
attggaacaatgattgctgatgctatcgacaaggttggacctgatggtgttttgtccatt
gagtcttcatcctcatttgagacgaccgtcgaagtggaagaaggaatggagattgacaga
ggatatatctcccctcaatttgttacaaacccagagaaattgattgttgagtttgagaat
gcaagagtcttgattacagaccagaagatttcagctatcaaggacataattcccctgtta
gaaaagaccactcaattgagaagccctctgcttattattgctgaggatgtctctggggag
gctttggcgactcttgttgtcaacaagttgaggggtatccttaatgttgctgccatcaaa
gctccaggttttggtgagcgcagaaaggctctcctccaagatattgccattttgactggt
gccgagtttcaagccaatgatcttggtctactgattgagaacaccacagttgagcagctt
ggtttggccagaaaggtgacaatctcgaaggactccactaccatcattgctgatcaagct
tcaaaggatgagttgcaatccagaattgcacaattgaaaaaggagttgtctgaaacagat
tctgtatatgacactgagaaattggctgagaggattgccaaactatctgggggagttgct
gttataaaggttggtgctgctactgaaaccgaacttgaggaccgtaagctccgtattgag
gatgccaagaatgccacttttgctgccatagaggaagggattgttcccggtggcggtgct
gcattggtacatctttcaacatatgtccctgcaatcaaggacagacttgaagatgcagat
gagaagctaggcgctgacattgtgcagaaggctctggtagcaccagcagcattgatagct
caaaatgctggaattgaaggtgaagtggtggtggagaaactaaaagagagtgaatgggag
gtcggctacaacgcaatgacagacacatacgagaacctagtggatgctggtgttatcgac
ccagcaaaggttacaagatgtgctctgcagaatgctgcctcagttgcaggaatggtcttg
accactcaggctattgtggtggagaaggctaagcccaagtcacctgctgctgctgctgca
caaggacttactgtgtaa
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