KEGG   Rosa chinensis (China rose): 112201770
Entry
112201770         CDS       T06020                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03083  Polycomb repressive complex
rcn04120  Ubiquitin mediated proteolysis
rcn04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112201770
   04120 Ubiquitin mediated proteolysis
    112201770
  09126 Chromosome
   03083 Polycomb repressive complex
    112201770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rcn04131]
    112201770
   04121 Ubiquitin system [BR:rcn04121]
    112201770
   03036 Chromosome and associated proteins [BR:rcn03036]
    112201770
Membrane trafficking [BR:rcn04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    112201770
Ubiquitin system [BR:rcn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     112201770
   Cul7 complex
     112201770
Chromosome and associated proteins [BR:rcn03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     112201770
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     112201770
SSDB
Motif
Pfam: Skp1_POZ Pup_ligase TP0900_4th BTB DUF1617 FAP206 Inhibitor_I24 Skp1
Other DBs
NCBI-GeneID: 112201770
NCBI-ProteinID: XP_024198457
LinkDB
Position
5:7562771..7563190
AA seq 139 aa
MSIVFKLKSSDNETFEVEEAAALLSETIKSSSSTEITVPNVKAEILGKVVEWCNKHAESE
GTKDQLIKEWDAEFVSVDQHVLFKLITAADYLQIKELVDQLTQRVGDMIKAKTFKTVEMT
YPMFNVEREVQEELKSLGF
NT seq 420 nt   +upstreamnt  +downstreamnt
atgtctatagttttcaaactgaaaagttctgacaatgaaacattcgaggttgaagaagct
gcagcactactctctgaaaccatcaagagctcatcgtccaccgagattacagtgccaaac
gtgaaggcggaaatcttaggcaaggtggtggagtggtgcaacaagcatgcagagagtgaa
ggcaccaaagatcaactcatcaaagagtgggacgctgagttcgttagtgttgaccaacat
gttctgttcaagctcataacggctgcagactatctacagattaaggaattggtggatcaa
ttaactcaaagagttggggacatgattaaggcaaagacattcaagacggtagaaatgact
tacccaatgtttaacgtcgagagagaagtgcaagaggaattaaaatcattgggcttctga

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