Rosa chinensis (China rose): 112201821
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Entry
112201821 CDS
T06020
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcn03021
]
112201821
Transcription machinery [BR:
rcn03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
112201821
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
TFIIB
Zn_ribbon_RRN7
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
112201821
NCBI-ProteinID:
XP_024198509
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All DBs
Position
5:7056159..7058057
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AA seq
518 aa
AA seq
DB search
MPICVSCNSNSFTPDDVSGRLYCSNCGHLQDFDNFVDVYGGVSGPTGTFIRLGTSGQGTD
YHYRETKIYEAKNLIDDVTLRLNLSPSRADEIKAMIAKITEGEFGQGNWFNVLIGACAYV
AMRRDSKSMPIAEVASTIGCDDYELGRMIMRVVDFLELKKPDFPEFDIVRLYERTLQNSR
MFGSLGGSVRERMKKQGIFLIQCAIKWFLTTGRRPLPMVVAILVLVAELNGVGGVSIQDC
AKEVNAVVNTCRLRYRELLEALVKAAQVLPWGKDVTVKNVLRHAPTVIQYMEKKSMSEPG
GKKHSEGGVGIDLRDVVSECLGRNCDADEAATEVEKLKKVSDDSRRMDKMKLSHECLAMV
YSKFLDEMESFKSSGGFGTVHEREERQYFDPHDCTEWWNGKSELSKKLLLKNILEKDVGL
DPMPPSYVKGLKACKRRRERINAAKQRIHKIMHPSNAHSDACISEDVQTGRKRKRRHTLD
WEDLIIETLLLHQVMEEEIEKGWYNSLLDLHVFNSGVV
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcccatctgcgtctcctgcaattccaactccttcacccccgacgacgtctccggccgc
ctctactgctccaactgcggccacctccaagacttcgacaacttcgtcgacgtctacggc
ggcgtctccggccccaccggcaccttcatccgcctcggcacctccggccagggcaccgac
taccactaccgcgaaaccaagatctacgaggccaagaacctcatcgatgacgtcactctc
cgcctcaacctctcgccgtcccgcgccgacgagatcaaggccatgatcgccaagatcacc
gaaggtgagttcggccaaggtaactggttcaatgtcttgatcggtgcttgtgcttatgtt
gctatgaggagggatagcaagtccatgccgatcgccgaggtcgcgtcgacgatcggctgc
gacgattacgagcttggtaggatgattatgcgtgttgttgattttctcgagttgaaaaaa
cctgatttccctgagtttgatattgtgagattgtatgagaggacgttacagaattcgagg
atgtttgggagtttaggggggagtgtgagggagaggatgaagaagcaggggatttttttg
atacaatgtgctattaagtggttcttgaccactggccgccggccgcttccgatggtggtg
gcgattttggttctggtggcagagttgaatggagtcggcggtgttagtattcaggattgt
gctaaggaagtcaatgctgttgttaatacttgtaggttgaggtatagggagcttttagag
gcgcttgtgaaggctgcacaggtgttgccttgggggaaggatgttacggttaaaaatgtt
ctcaggcatgcgccgacggtgattcagtatatggagaagaagtctatgtcggagcctgga
gggaagaagcattccgagggtggtgttgggattgatttgagagatgtggtcagtgagtgt
ttggggaggaattgtgatgcagatgaggctgcaacagaagttgaaaagttgaagaaggtt
tctgatgattctcggcggatggataagatgaagctttcgcatgaatgcttagccatggtt
tactcgaaatttttagatgagatggagagttttaagtcctctggtgggtttggaacagtt
catgaaagagaagagaggcagtattttgatccccatgattgcactgagtggtggaatggg
aagtcggaattaagcaagaagcttctgcttaagaatattttggagaaagatgtagggttg
gatcctatgccgccatcttatgttaagggtctcaaggcctgtaagaggaggagagaaagg
ataaatgctgccaaacagcgaattcataagattatgcatccatcaaatgctcattcagat
gcttgcatttctgaagatgtacagactggaagaaaaagaaagagaaggcatactcttgat
tgggaagatttaattattgaaaccctcctccttcatcaagtaatggaagaagagatcgag
aaggggtggtataatagcttattagatttacatgtatttaactcgggagttgtgtaa
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