Rosa chinensis (China rose): 112201882
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Entry
112201882 CDS
T06020
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.6
KO
K14487
auxin responsive GH3 gene family
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112201882
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GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Imm63
Motif
Other DBs
NCBI-GeneID:
112201882
NCBI-ProteinID:
XP_024198576
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Position
5:31226978..31229379
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AA seq
607 aa
AA seq
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MPEAPKSSLKQKNEEALKFIESVTENSDEVQKRVLGEILAANAHVEYLQRHGLNGHTDRE
TFKKIMPVITYDNIHPDINRIANGDTSQILCSKPISEFLTSSGTSGGERKLMPTIEEELE
RRSLLYSLLMPVMSQYVPELEKGKGMYFLFIKSEAKTPGGLVARPVLTSYYKSSHFKQRP
YDPYTNYTSPNETILCPDSYQSMYSQLLCGLCQNKEVLRVGAVFASGFIRAIRFLEKHWP
ILCKDIEFGTLNPQITDPSVRESVLKILKPDPKLACFIATECGKKSWQGIITRLWPNTKY
VDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPMCKPSEVSYTLIPTMCY
FEFLPVNRNNGVNSDSVSVPESLNEKEQQQLVDLVDVKLGQEYELVVTTYAGLYRYRVGD
VLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKYAVTHLVPFDATVAEYTSY
ADTLTVPGHYVLFWELSLNGSTPIPPSVFEDCCLAIEESLNSVYRQGRVSDKSIGPLEIK
IVEAGTFDKLMDYAISLGASINQYKTPRCVKFAPIVELLNSRVVSNYFSPKCPKWAPGHK
QWCNNHD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagctccaaaaagctctctgaaacagaagaacgaagaggctctcaagttcatc
gagagtgtcacagaaaactctgatgaggtccagaagcgtgttctgggtgaaatcctagct
gcaaatgctcatgttgagtatctacagcgacacggcctcaatggtcacactgaccgtgag
actttcaagaaaatcatgcctgttatcacctacgacaatatccatcctgacatcaaccgt
atcgcaaatggcgacacttcccaaatcctctgctcaaaacccatttcggagtttttgaca
agctctgggacatctggaggggagaggaaattgatgccaacaattgaagaagagctggag
aggaggtcactgctctatagcctattgatgcctgtgatgagccaatatgtgcctgaatta
gaaaagggcaagggaatgtactttttgttcataaaatctgaggccaaaacacctgggggc
cttgtggctcgtccagtgctcactagctattacaaaagctctcatttcaagcagaggcct
tatgacccttacacaaactacaccagcccaaatgagaccattctctgccctgactcctac
caaagcatgtactcccaattgctctgtggcctttgccagaacaaagaagtcctccgagtt
ggcgctgttttcgcctctggatttatccgagccattcgctttctcgagaagcattggcct
attctatgcaaggacatagaattcgggactcttaacccccaaatcaccgacccatcggtc
cgggaatcggtcttgaaaatcctcaaaccggacccgaagctagcctgtttcattgccacc
gagtgtgggaagaaatcatggcaagggatcataacaaggctgtggcctaacacaaagtat
gtggatgttatagtgactggcactatgtcacagtacattcctactttggattactacagc
aatgggcttcctctggtttgcaccatgtatgcttcctctgagtgctattttggtgtcaat
ctcaacccaatgtgcaaacccagtgaggtttcttacaccctcattcccactatgtgctac
ttcgagttcctccctgttaacagaaacaatggggtcaactcggattcggtgtctgtaccc
gaatcgctcaatgagaaggagcagcaacagttggtggatcttgttgatgtgaagctagga
caagaatatgagcttgttgtcacaacctatgctgggctttaccgctacagagttggagat
gtgctaagagtggcagggttcaagaacaaggctccgcaattcaacttcatctgcaggaaa
aacgtggttctaagcattgattcagacaagactgatgaggttgagctccaaaacgctgtg
aagtatgctgtgacccatttggtgccatttgatgcaactgtggcagagtacactagctat
gctgacactttaacagttccaggccactatgtgcttttctgggagcttagcctaaatggc
tcaactccaatcccaccctcagtgtttgaggactgctgcttggccattgaggagtcactc
aacagtgtgtaccgccaaggcagagtctccgacaaatcaatcgggccgctggagatcaag
attgttgaggctgggacttttgacaagctcatggactatgctataagcttgggagcttcc
attaaccaatacaagaccccaaggtgtgtgaagtttgcacccattgttgagctcttgaac
tctagggtggtctcaaactacttcagtcccaagtgccccaaatgggcccctggccacaag
caatggtgcaataaccatgattga
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