Rosa chinensis (China rose): 112201989
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Entry
112201989 CDS
T06020
Name
(RefSeq) beta-xylosidase/alpha-L-arabinofuranosidase 1
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00520
Amino sugar and nucleotide sugar metabolism
rcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112201989
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
112201989
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
112201989
NCBI-ProteinID:
XP_024198680
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Position
5:complement(9057168..9060724)
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AA seq
798 aa
AA seq
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MATIVSLLVYFSIASSFFVSSNAGRKLLNSTSVSTNGATNFTIVCDPSRYSNIGLNISDF
AFCDSALPYDARVKDLVDRMTLAEKVQQLGNKAAGVPRLGLPKYEWWSEALHGVSNVGPG
TYFDDVVPGATSFPPVILTAASFNESLWKEIGQVVSTEARAMYNLGKGGLTYWSPNINVV
RDPRWGRATETPGEDPYVVGAYAINYVRGLQDVKGTENFADLNSRPLKVSSCCKHYAAYD
VDNWLGVDRYHFDAQVTEQDMSETFLKPFEMCVKDGDVSSVMCSYNRINGIPACADTKLL
KDTIRGEWDLHGYIVSDCDSLEVMVNGHKWLGDTGVEASAQALKAGMDLDCGVYYPNFTE
SAVKQGKVKVKEIDNSLKQLYVVLMRLGFFDGNPIYNSLGKKDVCSQEHIELAREAAKEG
IVLLKNANETLPVNSYKIKKLAVVGPHANATTAMIGNYAGIPCKFISPLDAFSKYGEVKY
EVGCDVKCPNESLIFPAMQAAKEADVTIIFAGLDLSVEAESLDRTDLLLPGYQTQFINQV
AQVSKGPVILVILSAGGVDINFAKNNDNIKAILWAGYPGEQGGRAIADVVFGHYNPGGRL
PLTWYPADYVDMLPLTSMPLRPIDSLGYPGRTYKFYNGSTVYPFGYGLSYTKFNYTILSA
KRSVDIKLEKTQHCRDLEYKQGEKKPACPSVLIDDLDCQYDFEFEVEVRNVGGRDGGEVI
LVYSKPPSGIASTHAKQVIGFQRVFVEAGKTEKVKFVFNVYKSLGIIDYTAYNLLPSGSH
TISLGDDLVTFPLQVNLV
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggctaccattgtcagtttgctcgtttatttttccattgcctcttctttcttcgtttct
tctaatgctggaagaaaacttctcaactctacaagtgtttccaccaatggagccactaac
tttaccattgtgtgtgatccgtcaaggtactccaacatcggcctgaacatatctgacttt
gccttctgcgactcagccttgccgtacgatgctagggtcaaagacttggtggataggatg
accttggcagagaaagtgcagcagctcggaaacaaagcagctggggtgcctagactaggc
ttgcccaagtacgagtggtggtctgaggcactccacggtgtatccaatgtcggtccgggt
acgtactttgatgatgttgttcccggtgcaacaagcttcccccctgtcattctcaccgcc
gcgtcattcaacgagtccttgtggaaggagattggccaggttgtttcaacagaagcaaga
gccatgtacaacctaggaaagggtggattgacatattggagtcccaatataaatgtagtg
agggatccaaggtggggaagagccacagagacgcccggtgaagacccttatgttgttgga
gcttatgctataaactatgtccgaggcttgcaagatgttaagggtacagagaattttgca
gacttgaactctaggcctcttaaggtctcctcttgctgcaagcactatgctgcctatgat
gttgataactggcttggtgtggatcgttaccattttgatgcccaggttacggagcaagat
atgtcagagactttccttaaaccatttgagatgtgtgttaaagatggtgatgttagtagt
gtaatgtgctcctacaacaggattaatggaataccagcttgtgctgatacaaagctcttg
aaagataccattagaggagaatgggaccttcatggatacattgtctcagattgtgactct
ctagaagtaatggtgaatggccataaatggcttggtgacactggagtggaagcttctgca
caagcattaaaagcagggatggatttggactgtggagtctactaccctaatttcaccgag
tctgctgtgaaacaagggaaggtgaaggttaaagaaatagacaattctttgaagcagctt
tatgtggtacttatgaggctaggcttttttgatggaaaccctatttacaactcacttggc
aagaaagatgtgtgctcccaagaacacattgaattggcaagagaagcagccaaagaagga
attgttttactaaaaaatgccaatgaaactttgcctgtcaactcttacaagatcaagaaa
ttggccgtggtcgggcctcatgccaatgctactacagctatgattggaaattatgcaggt
attccttgcaagttcatctcacctcttgatgctttttcgaaatatggagaagtgaagtat
gaagtgggatgtgatgttaagtgtccaaatgagagcctgatattcccagccatgcaagct
gcaaaggaagctgatgtgacaataatttttgctggattagacttatcagttgaggctgag
agcttggacaggactgatcttcttctcccggggtatcaaacccaattcatcaaccaagtt
gctcaagtgtcaaaaggtccggtaattcttgtgatattgtctgcagggggtgttgatatc
aactttgccaagaacaatgataacatcaaagccattttgtgggctggataccctggtgag
caaggtggccgtgccattgcagatgttgtttttggacattacaatccgggtggaagatta
cctcttacatggtacccagctgattatgtggatatgctacccttaacctccatgccattg
aggccaattgatagcttaggatatcctggtcgtacatacaagttctacaatggatccaca
gtttacccatttggatatggtcttagctacaccaaattcaactacactatactatctgca
aagagatctgtagacattaagttggagaagacccaacactgccgtgacttggagtacaaa
caaggggaaaagaaaccagcttgcccttcagtcctcattgatgacttggactgccaatat
gatttcgagtttgaggttgaagtacgaaatgtgggtggaagggatggaggtgaagtcatt
ttagtttactctaaacccccaagtggcattgcctctacacatgctaagcaggttattggg
tttcagagggtgtttgttgaggctggcaagactgagaaagtcaaatttgtcttcaatgtt
tacaagagcttgggaattattgattatacagcttataatcttttaccatcaggcagccac
accatttcgctcggagacgatctggttacattccctctccaagttaaccttgtgtag
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