KEGG   Rosa chinensis (China rose): 112202111
Entry
112202111         CDS       T06020                                 
Name
(RefSeq) endonuclease MutS2 isoform X1
  KO
K07456  DNA mismatch repair protein MutS2
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    112202111
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112202111
DNA repair and recombination proteins [BR:rcn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     112202111
SSDB
Motif
Pfam: MutS_V Smr MSSS
Other DBs
NCBI-GeneID: 112202111
NCBI-ProteinID: XP_024198795
LinkDB
Position
5:5239070..5242927
AA seq 929 aa
MQKPMLTSLTPFNLTFFLSSPKSSYLFPKPTATAAVTNFSLSHSLQSETLEILEWPSVCN
HLSALASTSMGFSAAQKAQIPFGKSKSESQKLLDQTAAAVSAIAAIGSPPPDLLSIEDVS
EIVNDAVLGKLLTINELCAVRRTLIAAKALFEKLKALADSHRYLPLLEVLEGCDFLVKLE
RTIGLCIDCNLSEILDTASEDLEIIRFEKKRNMEKLDALLKEMSSKIFKAGGIDSPLVTK
RRARMCVGVRARYKYLVPDGVVLDASSSGATYFMEPSEAVELNNMEVRLSNAEKAEEIGI
LSFLTSEIAKSEGEIVYLLDKIVEVDLAFARAVYARWMNGVCPIFSSKDGKDLENGGAEI
GISIDIEGIQHPLLLESSLSSLSDALASSSRSALSSKDGNDVKMVYRSLSSGVSDFPVPI
DIKIGYGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMYLPARSQPKLPWFDLVLADIG
DQQSLEQSLSTFSGHISRICNILEVTSKESLVLIDEIGSGTDPSEGVALSTSILQYLKDR
VNLAVVTTHYADLSLLKEKDHQFENAAMEFSPETLQPTYRVLWGSIGDSNALSIAKSIGF
NQQIIERAQDWVERLRPEKQQERKGLLHRSLIEERNRLEAQAKMAASLHSETRDIYHELL
RPRLNFATPTQFQPIISIQDEAEDLDVRKRALMAKETLQVREEVKIVKSQLEAVLQEFDN
RLKTAGADQLNLLIKKSEAVIASIIEAHSPEDGFLVNETSETSYTPRFGEQVYLKGLRDK
IATVVEAPGDDGTVLVQYGKIKVRLKNNEIRAIPSSDKNAVTSSVPRLKQRVWRSRTVEN
KDAEVSYSPAVQTSKNTVDLRGMRAEEASYNLDMAIATRESQSVLFVVHGMGTGVVKERA
LELLKKHPRVAKYEAESPMNYGCTVAYIK
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgcaaaaaccaatgctcacctccctcactccattcaacctaaccttcttcctctcctcc
ccaaaatcttcatacctcttccccaaacccaccgccaccgccgccgtcactaacttctcc
ctctcccattccctccaatccgaaaccctcgaaatcctcgaatggccctccgtctgcaac
cacctctccgctctcgcctccacctccatgggcttctccgccgcgcagaaggcccaaatt
cccttcggaaaatccaagtccgagagccagaagcttctagatcaaaccgccgccgcggtc
tccgccatcgcagcgatcggttctccgccgcccgatctcctctccatcgaggacgtctcc
gagatcgtaaacgacgccgttttgggcaaattgctcactatcaacgagctctgcgctgtg
cgtagaacactcatagccgcaaaggccttgttcgagaagctgaaggccttagcagattct
cataggtacttgccattgcttgaagtacttgagggttgtgattttctagtgaagctggag
agaactatagggttgtgcatagactgcaatctttcggagattctcgacacggctagtgaa
gacttggagatcattaggttcgaaaagaagaggaacatggagaaattggatgctttgttg
aaggaaatgtcgtctaagatatttaaggccggggggattgacagtcctttggtgacgaag
cgcagggcgaggatgtgtgtgggtgttagagctaggtacaagtatttggttccagatggg
gtggtgttggatgctagtagttctggtgcgacgtacttcatggagccgagtgaggcggtg
gagttgaataacatggaagtgaggctttcgaatgctgagaaggctgaggaaataggcatt
ttgagcttccttacatcagaaattgcaaaatcagaaggggagatagtgtatttgttagat
aagattgtagaagttgatcttgcttttgctagagctgtgtatgctcggtggatgaatggg
gtatgcccaattttcagttctaaggatggcaaggatttagagaatggtggagctgaaatt
gggatatcgatagatattgaaggaatacaacatcctttgctccttgagtcatctcttagt
agtttgtctgatgcccttgcatccagttctagaagcgcactttcctccaaagacggaaat
gatgtaaaaatggtctatcgaagtttatctagtggtgtatctgattttccagtgccaata
gatatcaaaattggatatggaaccagagtggttgtaatctcagggcctaatactggcggg
aaaacagcttccatgaaaactttgggcctggcatctcttatgtcgaaagctggaatgtat
ctgcctgctagaagccagccaaagcttccatggtttgatcttgttctagctgatattgga
gatcaacagtctcttgagcaaagcctctcaacatttagtgggcacatatcacggatctgt
aatattttggaagtcacctcaaaagaatcacttgtcctcattgatgaaattggtagtgga
accgatccttcagaaggtgtggctctttctaccagcattttgcaatatctcaaagatcgc
gttaacttagctgttgtgactactcattacgcggatttaagtcttctaaaagaaaaggat
caccagtttgaaaatgcagccatggagttttctccagaaaccttacaaccaacttatcgg
gtcctatggggaagtattggtgactcaaatgcattgagtattgctaaatcaattggtttt
aatcaacaaataattgaacgcgcacaagattgggtggaaagattaaggccagaaaagcag
caagagcgtaaaggtttgctacatcggtcattaatagaggaaagaaacagactggaagct
caggctaagatggcagcgtctcttcattcagaaaccagggatatttatcatgagttgtta
cggccaagattaaattttgcaactccaactcaattccagccaattatatcaatccaagat
gaggcagaagatcttgacgtgcgcaagagagctcttatggcaaaggaaaccctacaggtt
cgggaagaagtgaagattgtcaaatctcaattggaagctgtgcttcaggagtttgataac
cgactcaaaactgctggtgctgatcagttgaatttgctgataaagaaatcagaagctgta
attgcatctattattgaggctcacagtcctgaagatggtttcttggtaaatgagacatct
gaaacttcatacacacctcgatttggggaacaagtctatttgaagggactcagagataag
atagctaccgtagttgaagcacctggagatgatgggacagtgctcgtacaatatggtaaa
attaaggttaggttgaagaataatgagatcagagctattcctagtagtgataagaatgcc
gtgactagttctgtcccacgtttgaagcagcgggtttggcggagccgtactgtggaaaac
aaagatgcggaggtttcttatagtccagcggtacaaacatcaaagaacacagtggatctt
cgtggcatgagggcggaggaagcttcttacaatctggacatggccatcgctactagagag
tctcagtcagttctttttgttgtacatgggatgggcacaggggttgtcaaagagcgagca
cttgagcttttaaagaaacatccacgagtagccaagtatgaagcggaaagtccaatgaat
tatggttgtacagttgcttacatcaagtga

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