Rosa chinensis (China rose): 112202285
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Entry
112202285 CDS
T06020
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112202285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcn04040
]
112202285
Ion channels [BR:
rcn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112202285
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Motif
Pfam:
Ion_trans
cNMP_binding
RusA
Motif
Other DBs
NCBI-GeneID:
112202285
NCBI-ProteinID:
XP_024198990
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Position
5:complement(46136519..46141940)
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AA seq
570 aa
AA seq
DB search
MMSNLEKTRKSPYITRVLVDPLFFYLPIIDGKRKCIGMDTILRNVTLIFRSLTDIGFMVN
IIHKICEAVNKTRADCLKNIEKMTAEERNRGVSGNKFAKSLARNLSWHTILIDFLAVLPI
PQVIIVAVRSSRCLDKRKILNFLLLAQYLPRVYRMRHSSIQLRPRTGIWVKCSFYFFLYI
LASHVLGAFWYYFSIQQETSCWHQACKKHGGVKCNFYCHENMTSRDLTFINSIDKYCLVD
VPANETAPFDFGIFLDSLKNNNTASIQFPKKFFYSYWWGVRNLSNFGTNLQTSTYVWENC
FAILISIIGLLLFLYLIGKVQTFISMKTANSEERRKKFKSKELDIQMWMRSNDLKTDMME
AIRVHTKKKWEEIQDANIENIFSILPVQSRKHLKQSLCMEMLSKVPKLRTLKDEALKPIC
DCLKPVVYQDNSFVFQEGEPLDRILFIIEGLIWTYQAAGATDSSSTSQNGNRKTGFSFLQ
KGGFYGDDQLLSWVIASQQNLPLFSNLPISEVNVKCHAKVEGFVLMAKDLKIVVSTNYKV
YWGLHNSSQEREKALIQAVKNVRDRRKMQK
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtaatttggagaaaacccggaagagcccatacataactcgagtcttagtggat
ccattgttcttttaccttccaataattgatgggaaaagaaagtgcattggaatggacaca
atattgagaaatgtgacacttattttccgatcactcaccgatatcggtttcatggtgaat
attatacataaaatttgtgaagctgtgaataaaacaagggcagattgtcttaaaaacatt
gaaaaaatgactgctgaagaacgaaaccgaggtgtgagcggaaataagtttgctaagtca
ttagctcgtaacttgtcgtggcacaccatcttaatcgactttttggctgttcttcccatc
ccccaagtgataatagtagctgttagaagctctagatgtttggataaaagaaagatacta
aactttcttcttctcgcccagtatctgccgagggtttatcgaatgcgtcattcatctata
caacttagaccaaggactggaatatgggttaaatgttcattctattttttcttgtacatc
cttgccagccatgtacttggagccttttggtattatttttctattcaacaagagacatct
tgttggcaccaggcgtgcaaaaagcatggtggagtaaaatgtaatttttactgccatgaa
aacatgacttcaagagatttgacattcatcaattctatagataaatattgccttgtagat
gttccggcaaatgaaactgcaccatttgattttggaatctttcttgattctcttaagaat
aataacacggcgtcaatacaatttccaaagaagtttttctactcttattggtggggagtt
cgaaatctgagtaattttggcacaaatttgcaaacaagtacttatgtgtgggaaaactgc
tttgcaattctgatttcaatcattggcctgctattattcttatatctcattggaaaagta
cagacatttatttcgatgaaaactgcgaattccgaggagagaagaaaaaaattcaaatca
aaagagctagatatacaaatgtggatgagaagcaatgatctcaagacagatatgatggaa
gccatcagagtacatacaaaaaaaaagtgggaagaaatacaagatgcaaatatagagaac
atcttctctattcttcccgtgcaatctcggaaacatcttaaacaatctctttgcatggaa
atgctgagcaaggtgccaaagcttagaactctgaaagatgaagctttgaaaccgatctgc
gattgtctgaagccagtggtctatcaggataatagctttgttttccaagaaggagaacca
cttgatcgcattctcttcatcatagaaggcttaatatggacataccaggcggcgggcgct
actgatagtagtagcactagccaaaatggaaaccgaaaaacaggtttcagttttcttcag
aaaggtggattttacggagacgatcaacttctgagttgggttatagcatcacaacagaat
cttcccttatttagcaaccttccaatctccgaagtgaatgtgaaatgccatgcaaaagta
gaaggctttgtactcatggccaaggacttgaaaattgtggtctccactaattacaaagtt
tattggggtctccacaattcttctcaggaaagagagaaggcattaattcaagccgtaaag
aacgtacgggatcgtcgtaaaatgcaaaagtag
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