Rosa chinensis (China rose): 112202421
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Entry
112202421 CDS
T06020
Name
(RefSeq) tubulin alpha-5 chain
KO
K07374
tubulin alpha
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04145
Phagosome
rcn04517
IgSF CAM signaling
rcn04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112202421
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112202421
09142 Cell motility
04814 Motor proteins
112202421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112202421
03036 Chromosome and associated proteins [BR:
rcn03036
]
112202421
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rcn04812
]
112202421
04147 Exosome [BR:
rcn04147
]
112202421
Messenger RNA biogenesis [BR:
rcn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112202421
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112202421
Cytoskeleton proteins [BR:
rcn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112202421
Exosome [BR:
rcn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112202421
Exosomal proteins of other body fluids (saliva and urine)
112202421
Exosomal proteins of colorectal cancer cells
112202421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
112202421
NCBI-ProteinID:
XP_024199203
LinkDB
All DBs
Position
5:complement(88948467..88951206)
Genome browser
AA seq
452 aa
AA seq
DB search
MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGQMPSDNTIGVGRDAFNTFFSETGSGK
HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHALLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISVPEITNAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYEPP
TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGVDDEEGGSEDYEN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagagagatcataagcattcatattgggcaggcaggtattcaggtgggaaattcatgc
tgggagctctattgtcttgagcatggaattcagcctgatggtcagatgcctagtgacaac
actataggtgttggaagggatgctttcaataccttcttcagtgagactggatcaggcaag
catgtccctagggccatatttgttgatctggaaccaactgttattgatgaagttaggaca
ggctcttaccgccaactattccaccccgagcagctcatttctggtaaagaagatgccgct
aataactttgcaagaggacattatacagttggaaaggaaattgtggatctctgccttgat
cgagtgaggaaattggccgacaattgcactggtttacaagggtttttggtgttcaatgct
gttggtggtggtaccggttctggtctggggtccttgttgttagaacgtttgtctgtggat
tatgggaaaaagtcaaagcttggattcaccatctatccttctccccaggtttcaacagca
gttgtcgagccttacaacagcgttctttctactcatgccctccttgaacacacagatgta
tctgtgctcttggacaatgaagctatctacgacatttgcaggagatccctagacattgag
agaccaacttataccaatttgaacagattgatttcacaagtcatttcatccttgacaaca
tcattgagatttgatggagccatcaatgtagatatcacagagttccagactaaccttgtc
ccgtatccacgtatccatttcatgctctcctcatatgctcctgtcatctcagctgcaaag
gcataccatgagcagatctctgttcctgagatcaccaatgcagtttttgagccctcaagc
atgatggcgaagtgtgatcccaggcatggcaagtacatggcgtgctgcttaatgtacagg
ggagatgttgttcccaaggacgttaacgctgctgttgcaactatcaaaacaaaaaggact
gtacaatttgttgactggtgcccaactggcttcaagtgcggtattaactatgaacctcca
acagttgtacctgggggtgatctggccaaggtgcagcgagcagtttgcatgatcagcaac
aacacagcagtggctgaggtgttctcacgcattgaccacaagtttgatctcatgtactca
aagagggctttcgtccactggtatgttggtgaaggcatggaagaaggagagttctcagaa
gcccgtgaagatctggctgcacttgagaaagattacgaggaagttggtgctgaaggtgtg
gatgatgaagaggggggaagtgaggattacgagaattga
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