Rosa chinensis (China rose): 112202479
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Entry
112202479 CDS
T06020
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcn01002
]
112202479
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcn04121
]
112202479
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112202479
Peptidases and inhibitors [BR:
rcn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112202479
Ubiquitin system [BR:
rcn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112202479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
CBM77
Motif
Other DBs
NCBI-GeneID:
112202479
NCBI-ProteinID:
XP_024199259
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All DBs
Position
5:complement(21482050..21487828)
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AA seq
645 aa
AA seq
DB search
MGLQFQLQMSWQPSLLNQKRKTGPPLGLKNLGNSCYLNSVLQCLTYTPPLANFCLRNQHS
SLCDSSDKERKRECPFCMLERRIVRSLSVDLSLDAPAKIRSCLNIFAEHFRHGRQEDAHE
FLRYVIDACHNTCLRLKKLRRNITGNGLSNGNGHANGNGQANGKANGTAPASSTVVMEIF
GGAMQSQVKCLSCGTESNKVDEIMDISLDVLHSNSLKDALQRFFQSELLDGQNKYKCERC
NKLVAARKQMSILQAPNVLVIQLKRFEGLLGGKIDKSIAFEEFLVLSSFMCKTSQDPRPE
YKLCGTIVHSGFSPESGHYYAYIKDAMGRWYCCNDQFVSLSTLQEVLSEKVYILFFSRTN
QRSVNAASNGLRSQNCNGHEASKKPKPALPPKGPQIKIYEQSSWKDISTKSQVDKVPSGP
RMKFNINGNLSTKRTPATDNGNIAYKNQSVGSNGEVKDSVSLDKSEKAKMTLINGDGLNG
NITSDTVEANNTQPFSSPIENGSVGSVKSELSEVTASVKTELPDHSELDSSGPKGHSMVL
GPKRKSRDSCILFEHDAQSLEKVEELKAGLKKEALSVLRSCGWADEVFSFMRSRKRLCVD
QVGITQNGDEAKKLLIRDSKSTFISKIPESLKGGFIKRIKSFSQE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgcaatttcaattgcagatgagttggcagccgagtctactgaatcagaagcgg
aagacaggcccgcctctagggttgaagaacctcggcaactcttgctacctcaacagcgtc
cttcagtgcctcacctacacccctcctctcgccaatttctgcctccgaaaccagcactcc
tccctctgtgactcttccgacaaggaacgcaagcgcgagtgtccgttctgcatgctggag
aggcgaatagtccgctccctcagtgtggatctcagtctagatgcgccggccaagattcgg
agctgtctgaatattttcgccgaacactttcgccacggtcgtcaggaagacgctcatgag
ttcctgcgttacgttattgatgcttgccacaacacttgccttcgcctgaagaagcttcgg
cgcaacatcaccggcaatggtttgtccaacggcaacggccacgccaacgggaatggtcag
gccaacggcaaagccaatgggacggctccggcgtcgtccacggtggtgatggagatattc
gggggagctatgcagagccaggtgaagtgtctatcctgtggcacagagtccaataaggtt
gatgagataatggatattagtcttgatgttttgcatagtaattcgcttaaagacgccttg
caaaggttcttccagtctgagcttttggatggccaaaacaagtacaagtgcgaaagatgt
aacaaattggtggcggctaggaagcaaatgtctatacttcaagcacctaatgttcttgta
atccaacttaagagatttgagggtctattgggtgggaagattgataaatccattgcattt
gaagagtttttggtgctgtcgagcttcatgtgcaaaacaagtcaggatccacgtccagaa
tataagctttgtggtactattgtgcattctggtttttcacccgagtctggtcattattat
gcatatattaaggatgcgatgggtcgttggtattgctgcaacgatcagtttgtctctctt
tcaactttgcaagaggtcttatctgaaaaggtttacatccttttcttctcccgtaccaac
caaaggtcggttaatgctgcttcaaatgggttaaggtctcaaaattgtaatggtcatgaa
gcttccaaaaaaccgaagcctgctcttccaccaaaaggaccacaaataaaaatttatgaa
cagtcttcttggaaggatatttctactaaatctcaggttgataaagtgccttcaggccca
cggatgaagtttaacatcaatggaaacttgagcaccaaaagaactcctgcaactgataat
ggaaacattgcttacaagaaccaatctgtgggatcaaatggggaggtgaaggactcggtt
agtttggacaaaagtgagaaagccaagatgactttgataaatggggatggtttgaacggg
aatataacatctgatactgttgaagctaacaacacccaaccattttcttcaccaatagaa
aatggtagtgtgggttcagtgaaatccgaactctctgaagtaactgcttcagtgaaaacc
gaactccctgatcactctgaattggatagcagtggtcccaaaggtcactccatggtcctt
gggcccaaaaggaaatctcgggattcatgcattttgtttgaacatgatgctcaatctctg
gaaaaagttgaagaattgaaggcaggtctcaagaaagaagctctctcagttttgcgctca
tgcggttgggcagatgaggttttcagttttatgcgttcccggaagaggttatgtgtagat
caagttggaatcactcagaatggtgatgaagcaaagaaactgttgatcagggattccaaa
tcaacttttatttcaaagatacccgagtctttgaaggggggcttcatcaaacgtattaaa
tcatttagccaagaataa
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