Rosa chinensis (China rose): 112202680
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Entry
112202680 CDS
T06020
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112202680
Membrane trafficking [BR:
rcn04131
]
Protein recycling
Others
EARP complex
112202680
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Osteoregulin
Motif
Other DBs
NCBI-GeneID:
112202680
NCBI-ProteinID:
XP_024199449
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Position
5:59960609..59975754
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AA seq
1121 aa
AA seq
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MLPNLSPFGSNLGNPFLLNGDLSSEGAPAPSVLFLVPFLLFQGRTGMDLSKVGEKILSSV
RSARSLGLLPPASDRPEVPARAAAAAVVARAIAGLPPHQRYGLSSSSEELSSIYGSRQQH
GEEVEEIEEEFYEEGFDPVRHILEHIPSDENELAYFERQAALKLAQLDRVSEHLSRNVME
HHEVMVKGMHLVRELEKDLKVANVICMNGRRHLTSSRNEVSRDLIVNSYSKKKHALLDMV
PVLTELRHALEMQSELESLVEEGNYCRAFQVLSEYLQLLDSFSELSAVQEMSRGVEVWLG
QTLQKLDSLLLGVCQKFNEEGYITVVDAYALIGDISGLAEKIQSYFMQEVLSETHSILKT
IVQEDQEVDMQNSRLTYSDLCRQIPEPKFRQCLLNTLEILFKLMCSYHEIMAFQLDDKDS
AEKTSSIEPEESDISQIPGGVQNISTSFSSAKANGSLSECVDVIAGSSSMEESHTNSSTE
PTGNTTSVCTTSHDLVDEARMDGSAASTSGSPWYQLRKDATAFVSQTLQRGRKNLWHLTT
TRVSVLLSSASVSSASIHQFLKNYEDLSAFILAGEAFCGIEAADFRQKLKAVCESYFLAF
HRQNIFALKMVLERELWLIMPPDTVQEITFPGLVGDGAPLIIPSNSKSRVLLSDKSARLV
DTGVKKSGFSIWIKNGNPFALKLPHSSKEGPKGNGTTSGEFDGNFSEGDKVSPRKSDANH
SNGANSVSEDENEDLLADFIDEDSQLPSRISKPKHPRSQSSHWNAGELIAQTGSSICLLR
SMDKYARLMQKLDIVNVEFFKGICQLFEVFFHFVFETFAQQNSNSGGKGSSDPINYRLKT
ALSRIQQNCDQWMKPSSSSSPASLNSPFTHADITPMSPSSTNFGSTPGTSFGLKERCAGA
DTLSLVARILHRSKAHLQTMLFQKNAAVVDDFYVNLVDAVPDLIEQIHRTTARLLLHING
YVDRIANAKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIRKEVQDRLLDYGLEIVAH
TLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHFVSMNVKPHLQIVEGFIKAYYLPETEY
VHWARAHPEYTKNQIVGLINLVATMKGWKRKTRLEVLEKIE
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgaatctgtctccctttggcagcaatttgggcaatccgtttttgttgaatggc
gatttgagcagcgagggtgctcctgctcctagcgttttgttcttggtcccgtttctcttg
ttccaaggacgaaccggaatggatttgtccaaggtcggcgagaaaattctcagctccgtc
aggtctgccagatcactcggtcttcttcctcccgcttctgatcgcccggaggttccagcg
cgagctgcagctgctgcagttgttgctcgtgctattgcgggactgcctccacatcaaaga
tatggcctctcttcaagctctgaagaattgagctcaatttatgggagcagacaacaacat
ggtgaagaagtggaggagatagaggaagaattctatgaagagggttttgatccagttaga
catattttggagcatattccttctgacgaaaatgagctggcttattttgagagacaggca
gctcttaaattagcacaactggatagagtatcagaacatttatcccgaaatgttatggaa
catcatgaagtaatggtgaaggggatgcatttggtcagggaattggagaaagacttaaaa
gttgcgaatgtcatttgcatgaatggaagacggcatcttacttcatcgagaaatgaggtt
tctagggatctgatcgtaaattcctattccaagaagaaacatgctcttctggacatggtt
ccagttttgactgagcttcgtcatgcgttagaaatgcaatccgaactcgagtctcttgtt
gaggaaggaaattactgtagggcctttcaagtactgtctgagtatctgcagctattagat
agtttctcagaactatctgcagtacaagagatgagccgtggagttgaggtttggctggga
caaactcttcagaagctggattccttgttgctaggagtgtgccagaaattcaatgaggag
ggctatataactgtggttgatgcgtatgctctaattggggacatctctggtcttgctgag
aagatacaaagttactttatgcaggaagttctctcagaaacccattctatattgaagacc
attgtgcaagaggatcaggaagtagacatgcaaaatagtcgacttacctacagtgatcta
tgccgtcagatacctgaacctaagtttaggcagtgtttgttaaatacactagagattcta
ttcaagttgatgtgctcatatcatgaaatcatggcctttcagctggatgataaggattcg
gccgagaaaacttcaagcattgagccagaggaaagtgacatctctcaaattccaggaggc
gttcagaacatttcaacgtctttctcgtccgcaaaagctaatggctctctctcagaatgt
gtagatgtaatagcaggttcatcttctatggaggaatctcataccaactcttccaccgag
cctacgggaaacaccacttccgtgtgtacaacatctcatgatctagttgatgaggctagg
atggatggcagtgctgcgtcaacaagtgggtctccttggtatcaactgcggaaagatgcc
actgcatttgtttcacaaacccttcaaagaggacgcaaaaatctctggcatctcacaact
actcgtgtatcagtcttgctttcttctgcttctgtatcttctgccagcattcaccagttc
ttgaaaaattatgaagatctgagtgccttcatcttggctggggaagcattttgcggaatt
gaagcagctgacttcaggcagaagttgaaggcagtttgtgaaagttactttttagctttt
catcggcagaatatctttgcgctcaaaatggtcctggaaagagaactttggttaatcatg
ccacctgatacggtacaagaaattacctttcctgggcttgttggtgatggagcaccttta
attattccatctaatagtaagtccagggtgctactttctgataagtctgctagattggtt
gatactggtgtcaagaagagtggtttttctatttggataaaaaatggaaacccttttgcg
ttaaaactgccacactcttccaaagaaggtccgaaagggaatggtacaacttctggtgaa
tttgatggaaattttagtgaaggtgacaaggtctctccacgaaagagtgatgccaatcat
tcgaatggtgctaattctgtttcggaagacgaaaatgaggaccttcttgcagactttatt
gatgaggatagtcaactccccagtcgaatttcaaaaccgaaacacccgagaagccaatct
tcacactggaatgctggagagctaatagcccaaacaggatcgtctatttgccttctaagg
tcaatggataaatatgccaggctaatgcagaaattagatatagtcaatgtggagttcttc
aaggggatatgccagttgtttgaggtattctttcattttgtatttgaaacatttgctcag
caaaatagcaactctggtggaaaaggctcatctgacccgattaattatcgcctgaagaca
gcattgtccagaatacaacaaaattgtgaccagtggatgaagccctcatcatcatcttcc
cccgcatctttgaattcaccatttacacatgcagatatcacacctatgagtccttccagt
acaaattttggtagcacacctggaacgtcttttggtctcaaggaaagatgtgctggtgct
gatactctctctctcgttgctcgaatattgcatagatccaaggctcatctccagacaatg
ctttttcagaaaaatgctgctgtagttgatgatttctatgtgaatttggtggatgctgta
ccagatcttatagagcaaattcataggacaactgcaagattgctcctccatattaacggg
tatgttgatcggattgccaatgcaaaatgggaagtcaaagaacttggactcgaacataat
gggtatgttgatttgttgttgggagaatttaagcactacaaaacaaggcttgctcatggg
ggaatccgcaaggaggttcaagatcgcctcttagattatggactggaaattgttgcccat
actcttgtagaaggtctatcacgtgtcaagaggtgtactgatgaagggagggctctcatg
tcattggatcttcaggttttgatcaatgggttacaacattttgtctccatgaatgttaag
cctcatttgcaaatagttgagggcttcattaaggcatactatcttcctgaaactgaatat
gtgcactgggcacgcgcacaccctgagtatacaaaaaatcaaattgttgggttgatcaat
ctggttgccacaatgaaaggttggaagagaaaaactaggttggaagtactagaaaagatc
gaatga
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integrated database retrieval system
