Rosa chinensis (China rose): 112202682
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Entry
112202682 CDS
T06020
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112202682
Membrane trafficking [BR:
rcn04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112202682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
112202682
NCBI-ProteinID:
XP_024199457
LinkDB
All DBs
Position
5:18474633..18490759
Genome browser
AA seq
1831 aa
AA seq
DB search
MLSLRPRRDSTPATTKWHNKFDENLEQWPHLKELVQCYTTDWVKDDNKYGHYESVGPPSF
QNQIYEGPDTDIETEMHLAGARRTKADDTTDDDLPSTSGRQFTDAIASDSAHSNDPKHFG
QSPLPAYEPAFDWENERSLICGQRVPETPISHGLKISVKVLSLSFQAGLVEPFYGTICLY
NRERREKLSEDFYFRHAPTETQNISVEPRGIFYLDAPSSSVCLLIQLEKHATEEGGVTPT
VYSRKEPVHLTEKEMQKLQVWSQIMPYRESFAWAIVSLFDNSIGAASGGSASPSSPLAPS
ISGSSHEGVFEPGAKVTLDGKLGYSSRSSVVVEISNLNKVKESYTEDSLQDPKRKVHKPV
KGVLRLEIEKHQNDNVDLENLSESGSVTNDSIDDRINDSTFGKLPSNGLDGPQGSSSKWN
SFDTKEISGNGSSSHGNPVTGPDDFQAFDFRTTTRNEPFLQLFHCLYVYPMTVSLSRKRN
LFIRVELREDDNDIRGQPLEAMYPREPGASLQKSAHTQVTVGARVACYHDEIKLSLPAMW
TPTHHLLFTFFHVDLQTKLEAPKPVVIGYASLPLSTHAQLRSEISLPIMKELVPHYLQDM
GRERLDYLEDGKNIFRLRLRLCSSLYPINERIRDFFLEYDRHTLRTSAPWGSELLEAINS
LKNVDSIALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNIVTRVQQESVDDAERNHFL
VNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKS
MALEKMRLFYHNLPLGEDIPPMQLKEGVFRCIMQLYDCLLTEVHERCKKGLGLAKRLNSS
LAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLTFLQIICDHDLFVEMPGRD
PSDRNYLSSVLIQELFLTWDHDDLSLRAKAARVLVVLLCKHEFDARYQKPEDKLYIAQLY
FPLIGQILDEMPVFYNLNAVEKREVLVAILQIVRNLDDASLVKAWQQSIARTRLFFKLME
ECLVLFEHRKPADGMLMGSSSRSPVGDGPASPKYSDRLSPAINNYLSEASRQEVRPQGTP
ENGYPWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHPILRQKLELWEENL
SASVSLQVLEITEKFTVMAASHSIATDYGKFDCVTAIFMSFFSRNQSLTFWKSLLPVFNS
VFNLHGATLMSRENDRFLKQVTFHLLRLAVFRNDNIRKRAVTGLQILMRSSFYYFMQTAR
LRAMLIITLSELMSDVQVTQMKADGTLEESGEARRLRRSLEEVADAAKSPSLLRECGLPE
SALLEIPEKMTENRWSWSDVKFLSDSLLLALDASLEHALLGSLMTMDRYAAAESFYKLAM
AFAPVPDLHIMWLLHLCDAHQEMQSWAESAQCAVAVAGIVMQALVARNDGVWSKDHISAL
RKICPMVSSEISSEAAAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELFHFCASILELV
IPVYKSRRAYGQLSKCHTMLTNIYESILEQESSPIPFTDATYYRVGFYGDRFGKLDRKEY
VYREPRDVRLGDIMEKLSHIYESRMDGNHTLHIIPDSRQVKADELQPGVCYLQITAVDPV
MEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEGS
FPALVNRLVVTKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRIL
QGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGE
EDQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcctccgccctcgccgcgattctactccggccaccaccaaatggcacaacaag
tttgatgagaatttggagcagtggccacatctgaaggagctggtgcagtgttacactaca
gactgggttaaggatgacaacaagtatggccattacgagagtgttggtccgccgtcgttt
cagaaccagatttatgaggggcctgacactgatattgagactgaaatgcaccttgctggt
gcaaggcgaaccaaggcggatgataccactgatgatgatttaccaagtacctcagggcgc
caatttacggatgcaatagcatctgattcagcacactccaatgatccaaagcattttggt
caatctcctctccctgcttatgaaccagcttttgattgggaaaatgaaagatcattgata
tgtggtcaaagggttccagaaactccaatatctcatggcctgaagatctcagtgaaagtt
ctgtccctatcatttcaagctggactagttgagccattttatggtacaatttgcttatat
aatagggagagaagagaaaagttgtcagaggatttctattttcgtcatgcaccaactgaa
acacagaatatttctgttgaaccccgtggaatcttctatttagacgctccatcatcatca
gtttgtcttctgatccagttagagaagcatgccacagaagaaggcggggttacgcctaca
gtttattctcgtaaagaaccggtacatctgactgagaaagaaatgcaaaaactgcaggtg
tggtctcaaataatgccttacagagagtccttcgcctgggctattgtttcattatttgat
aacagcattggtgcagcttctggtgggtctgcttccccaagcagtcctcttgctcctagt
atatcaggtagttctcatgagggtgtgtttgagcctggtgctaaagtcacattagatggg
aagctaggctattcaagtcgaagctccgtcgttgtcgaaatatcaaacttaaacaaagtt
aaagaaagctatactgaggactcacttcaggatcccaaacgcaaggttcataaacctgtg
aaaggcgttttgaggctggaaatcgagaagcaccagaatgacaatgttgacctggaaaat
ttatcagaaagtggtagtgtgaccaatgactctattgatgatcgcattaacgattccacg
tttgggaagctcccaagtaatggtttggatggtcctcagggtagcagttctaagtggaat
tcttttgataccaaagagatttctgggaatggatcaagttctcatggaaatccagttacc
ggtcctgatgattttcaagcttttgacttccgtactacaacaagaaacgagcctttcttg
cagctttttcattgtctctatgtatatcccatgactgttagtttaagtcgaaagaggaat
ttgttcataagggttgaacttcgggaggatgataatgatattcgtggacagcctttagag
gcaatgtatccaagggagccaggtgcatcactacagaagtcggctcacacacaagtgact
gtgggggcaagggtagcatgctaccatgatgagatcaaactttccctccctgctatgtgg
acaccaacacatcatctcttgtttactttttttcatgttgatcttcaaacaaagttggaa
gcaccaaagcctgtagtaattggatacgcgtcacttccactgtccacacatgcacagttg
cgatctgaaatttcattgccaattatgaaagagttggttccacattatcttcaggatatg
ggcagagagaggttggattatttggaagatggaaagaatatcttcagattgcgcttaaga
ctttgttcgtcattatatccgatcaatgagcgaataagagatttttttcttgaatatgat
agacacactcttcgaacaagtgcaccttggggttctgaacttctggaggctattaacagt
ttaaagaatgttgattccattgctctgcttcagtttctccatccaattttgaacatgctc
ctccatttaataggcaatggcggagaaaccctccaggttgcagctttcagagccatggtt
aatatcgttacccgggtgcagcaggagtcagttgatgatgcggaaagaaaccatttcctc
gtcaactatgttgattatgcttttgatgactttgggggtcgccaaccacctgtttatcct
ggtttgtcaactgtttggggaagtttggctcgtagtaaggccaaaggataccgtgttgga
cctgtgtatgatgatgttttggcaatggcttggtttttccttgagctaattgtcaagtca
atggcattggaaaagatgcgactcttctatcataatcttccattaggtgaagacattccg
cctatgcaattgaaagaaggtgtattcagatgcataatgcagttgtatgattgcctacta
actgaggtgcacgaacgttgtaagaagggactgggcttggcaaagcgtttaaatagcagt
ttggctttcttttgttatgatctcttgtcgattatcgaacctcgccaagtttttgaattg
gtgtccttataccttgacaagttttctggggtatgtcaatcagttttgcatgattgcaaa
ctcacatttttgcaaatcatttgtgatcatgatctttttgtggaaatgcctgggagagac
ccttctgataggaactacctctcttctgttttgatccaagagctttttcttacttgggat
catgatgatttatctttgcgggcaaaggccgcaagagttttagtagtcttgttgtgcaag
catgagtttgatgctcgataccagaagcctgaagataaattatatattgcccaactatat
tttccacttatcggacagattctagatgaaatgccagtcttttacaatctcaatgctgtt
gaaaagcgtgaagtcttggttgctattttacaaattgtgcggaaccttgatgatgcttca
cttgtcaaggcatggcagcagagcatcgctagaactagattattcttcaaactcatggag
gaatgccttgttctatttgagcacagaaaacctgctgatggcatgcttatgggttctagt
tctcgaagtcctgttggtgatggccctgcttctcccaagtattctgatagactttctcct
gcaatcaacaactatctgtctgaggcatcccgacaagaagtcagacctcaaggtacaccc
gaaaatggttacccatggcagagagtaaattctcagttaagctctcctagccagccatat
tccttgagagaagctctcgctcaggcacaatcttccaggattggagcttccgctcaagca
ctaagagaatctttgcatccaatattgaggcaaaaattggagctctgggaagaaaacttg
agtgcttctgtcagtctgcaggttttggaaataactgagaagtttaccgtaatggcggca
tcacatagcatcgctaccgactacggaaaatttgattgcgtcacagccatattcatgagc
ttcttctctcgaaatcaatcactgactttctggaaatcattgcttcctgtcttcaacagt
gtcttcaatcttcatggcgcaactttgatgtcaagggaaaatgaccgcttcttaaagcaa
gtcactttccatcttcttcgacttgcagtgttccgaaatgataatatcagaaaaagggct
gttactgggctccagatactcatgaggagttctttctactactttatgcaaacagcaaga
ttgagggccatgctaatcatcacattatcagagttgatgtctgatgtacaagtgactcag
atgaaggctgatggaacactagaagagagtggtgaagcacggcgccttcgcagatcactg
gaggaagtggcagatgcagctaagagccccagtctattgagagagtgtggacttcctgag
agtgccttgttagaaattcctgaaaaaatgactgaaaataggtggtcctggtcagacgtg
aaatttctttctgacagtcttcttcttgctcttgatgccagcttggaacatgcactcctg
ggctctttgatgactatggatagatatgcagctgcagaaagcttctataagcttgctatg
gcatttgcccctgtcccagatcttcatataatgtggttacttcatttatgtgatgcacat
caagaaatgcagtcgtgggcagaatctgctcagtgtgctgtcgctgtggctggtattgta
atgcaggctttggtggccagaaatgatggtgtttggagcaaagatcacataagtgctcta
cgtaaaatttgtccaatggtcagtagtgagatcagctctgaggctgctgcagctgaggta
gagggatatggtgcatcaaaacttactgttgactctgccgtgaagtacctacaactcgca
aataagctcttttctcaagctgaactttttcacttctgtgcaagcattctggaacttgtt
attccagtttataaaagcaggcgggcatatggacagctgagcaaatgtcacacaatgctt
actaacatatatgaatcaatccttgagcaggaatcaagcccaattccattcactgatgca
acatactatagggtggggttttatggtgatagatttggaaaactggacagaaaggaatat
gtatacagagagccacgtgatgtaagactaggtgacataatggagaaacttagccatatc
tacgagtctaggatggatggaaatcacaccttacacatcattccggattctaggcaggta
aaggcagatgagttgcagcctggagtatgctatcttcagataactgctgttgatccagtc
atggaagatgaagatttgggaagcaggagggagagaatcttttctctttcgacgggaagt
gttcgtgcgcgagtctttgaccgctttttgttcgatacaccttttacgaaaaatggaaaa
actcaaggtggattggaagaccagtggaagaggcggactgttcttcagactgaaggttcc
ttcccagctcttgttaacaggcttgtagttactaaatccgaatcgcttgagttctcccct
gtagaaaatgccattggaatgattgaaactcggacggctgctctacgtaatgaacttgaa
gagcctcgcagttctgagggggatcaactcccacgtctccagagcctacagagaattctt
caaggaagcgttgcagttcaggtcaacagtggtgttctaagtgtgtgcactgcattcctt
tccggtgaaccagcgacaaggttgcggtcacaagaattgcagcaactcattgcggcgctc
cttgaatttatggctgtatgcaagcgtgccatccgtgtacacttcagattgattggcgag
gaagaccaagaattccacacacagcttgtgaatggatttcaatctctaactgctgagtta
tctcattatatccctgccatcctgtccgagctgtga
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integrated database retrieval system
